RNA–Protein interactions for RNA: ENST00000515266.1

MBD4-210, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-210ENST00000515266 AEBP2Q6ZN18 517 aaPredicted RBP20.93■□□□□ 0.94
MBD4-210ENST00000515266 CHIC1Q5VXU3 224 aa20.36■□□□□ 0.85
MBD4-210ENST00000515266 PHF23Q9BUL5 403 aaPredicted RBP17.92■□□□□ 0.46
MBD4-210ENST00000515266 SENP3Q9H4L4 574 aaPredicted RBP17.72■□□□□ 0.43
MBD4-210ENST00000515266 FOXD1Q16676 465 aa16.48■□□□□ 0.23
MBD4-210ENST00000515266 PLPPR3Q6T4P5 718 aa16.47■□□□□ 0.23
MBD4-210ENST00000515266 PPP6R1Q9UPN7 881 aa15.82■□□□□ 0.12
MBD4-210ENST00000515266 ADRA2BP18089 450 aa15.79■□□□□ 0.12
MBD4-210ENST00000515266 PIAS4Q8N2W9 510 aaPredicted RBP15.5■□□□□ 0.07
MBD4-210ENST00000515266 MSH5O43196 834 aa15.18■□□□□ 0.02
MBD4-210ENST00000515266 PPP4R3CPQ6ZMV5 832 aa14.52□□□□□ -0.09
MBD4-210ENST00000515266 SCAF1Q9H7N4 1312 aaKnown RBP14.39□□□□□ -0.11
MBD4-210ENST00000515266 MAPK8IP2Q13387 824 aaPredicted RBP14.35□□□□□ -0.11
MBD4-210ENST00000515266 DMRT2Q9Y5R5 561 aa14.16□□□□□ -0.14
MBD4-210ENST00000515266 KCNA4P22459 653 aa14.14□□□□□ -0.15
MBD4-210ENST00000515266 CNKSR2Q8WXI2 1034 aa14.12□□□□□ -0.15
MBD4-210ENST00000515266 NCBP3Q53F19 620 aaKnown RBP14.09□□□□□ -0.15
MBD4-210ENST00000515266 POTEDQ86YR6 584 aa13.96□□□□□ -0.17
MBD4-210ENST00000515266 NPM3O75607 178 aaKnown RBP13.93□□□□□ -0.18
MBD4-210ENST00000515266 RNF216Q9NWF9 866 aaPredicted RBP13.87□□□□□ -0.19
MBD4-210ENST00000515266 HOXD11P31277 338 aaPredicted RBP13.85□□□□□ -0.19
MBD4-210ENST00000515266 DNAJC5BQ9UF47 199 aa13.57□□□□□ -0.24
MBD4-210ENST00000515266 DCAF8L1A6NGE4 600 aa13.49□□□□□ -0.25
MBD4-210ENST00000515266 SLC4A1APQ9BWU0 796 aaKnown RBP13.42□□□□□ -0.26
MBD4-210ENST00000515266 SLC4A2P04920 1241 aa13.19□□□□□ -0.3
MBD4-210ENST00000515266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.15□□□□□ -0.33e-6■■□□□ 11.7
MBD4-210ENST00000515266 ZBTB22O15209 634 aa13.04□□□□□ -0.32
MBD4-210ENST00000515266 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
MBD4-210ENST00000515266 FOXD4L1Q9NU39 408 aa13.01□□□□□ -0.33
MBD4-210ENST00000515266 U3KPZ7 1027 aaPredicted RBP12.98□□□□□ -0.33
MBD4-210ENST00000515266 EHMT2Q96KQ7 1210 aa12.97□□□□□ -0.33
MBD4-210ENST00000515266 CSRNP3Q8WYN3 585 aa12.88□□□□□ -0.35
MBD4-210ENST00000515266 MYCNP04198 464 aaPredicted RBP12.86□□□□□ -0.35
MBD4-210ENST00000515266 C1QBPQ07021 282 aaKnown RBP12.85□□□□□ -0.35
MBD4-210ENST00000515266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.73□□□□□ -0.37
MBD4-210ENST00000515266 HNRNPUL2Q1KMD3 747 aaKnown RBP12.73□□□□□ -0.37
MBD4-210ENST00000515266 CACNB1Q02641 598 aaPredicted RBP12.7□□□□□ -0.38
MBD4-210ENST00000515266 SAMD1Q6SPF0 538 aaPredicted RBP12.7□□□□□ -0.38
MBD4-210ENST00000515266 SPINK5Q9NQ38 1064 aaPredicted RBP12.62□□□□□ -0.39
MBD4-210ENST00000515266 APLP2Q06481 763 aa12.6□□□□□ -0.39
MBD4-210ENST00000515266 ATXN8OSP0DMR3 200 aa12.55□□□□□ -0.4
MBD4-210ENST00000515266 ATF5Q9Y2D1 282 aaPredicted RBP12.55□□□□□ -0.4
MBD4-210ENST00000515266 CAPN15O75808 1086 aa12.54□□□□□ -0.4
MBD4-210ENST00000515266 ZNF219Q9P2Y4 722 aaPredicted RBP12.47□□□□□ -0.41
MBD4-210ENST00000515266 TRHP20396 242 aaPredicted RBP12.46□□□□□ -0.41
MBD4-210ENST00000515266 DSG3P32926 999 aa12.38□□□□□ -0.43
MBD4-210ENST00000515266 ABCB7O75027 752 aa12.33□□□□□ -0.44
MBD4-210ENST00000515266 POLA2Q14181 598 aa12.26□□□□□ -0.45
MBD4-210ENST00000515266 ZBTB12Q9Y330 459 aaPredicted RBP12.04□□□□□ -0.48
MBD4-210ENST00000515266 MKRN4PQ13434 485 aaPredicted RBP12.01□□□□□ -0.49
MBD4-210ENST00000515266 FBLN2P98095 1184 aa11.97□□□□□ -0.49
MBD4-210ENST00000515266 OSCARQ8IYS5 282 aa11.87□□□□□ -0.51
MBD4-210ENST00000515266 RBM42Q9BTD8 480 aaKnown RBP11.76□□□□□ -0.53
MBD4-210ENST00000515266 SPDYE2BA6NHP3 402 aa11.74□□□□□ -0.53
MBD4-210ENST00000515266 SPDYE6P0CI01 402 aa11.74□□□□□ -0.53
MBD4-210ENST00000515266 SPDYE2Q495Y8 402 aa11.74□□□□□ -0.53
MBD4-210ENST00000515266 SSUH2Q9Y2M2 353 aa11.67□□□□□ -0.54
MBD4-210ENST00000515266 SPDYE4A6NLX3 237 aa11.66□□□□□ -0.54
MBD4-210ENST00000515266 ZNF692Q9BU19 519 aaPredicted RBP11.65□□□□□ -0.54
MBD4-210ENST00000515266 FKBP8Q14318 412 aa11.62□□□□□ -0.55
MBD4-210ENST00000515266 AKT1S1Q96B36 256 aa11.62□□□□□ -0.55
MBD4-210ENST00000515266 REM2Q8IYK8 340 aaPredicted RBP11.52□□□□□ -0.57
MBD4-210ENST00000515266 PROM2Q8N271 834 aa11.52□□□□□ -0.57
MBD4-210ENST00000515266 PABPN1Q86U42 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
MBD4-210ENST00000515266 PITPNM1O00562 1244 aa11.4□□□□□ -0.58
MBD4-210ENST00000515266 SPDYE1Q8NFV5 336 aaPredicted RBP11.39□□□□□ -0.59
MBD4-210ENST00000515266 CHRDL2Q6WN34 429 aa11.32□□□□□ -0.6
MBD4-210ENST00000515266 CLEC11AQ9Y240 323 aa11.32□□□□□ -0.6
MBD4-210ENST00000515266 STAG3Q9UJ98 1225 aa11.3□□□□□ -0.6
MBD4-210ENST00000515266 PRR29P0C7W0 189 aa11.21□□□□□ -0.61
MBD4-210ENST00000515266 FXR2P51116 673 aaKnown RBP eCLIP11.2□□□□□ -0.62
MBD4-210ENST00000515266 FBXO3Q9UK99 471 aa11.2□□□□□ -0.62
MBD4-210ENST00000515266 PIP4P2Q8N4L2 257 aa11.18□□□□□ -0.62
MBD4-210ENST00000515266 CREBZFQ9NS37 354 aa11.11□□□□□ -0.63
MBD4-210ENST00000515266 VASPP50552 380 aaPredicted RBP11.1□□□□□ -0.63
MBD4-210ENST00000515266 PRKAR2AP13861 404 aaKnown RBP11.09□□□□□ -0.63
MBD4-210ENST00000515266 CHADLQ6NUI6 762 aa11.09□□□□□ -0.63
MBD4-210ENST00000515266 MIER1Q8N108 512 aa11.04□□□□□ -0.64
MBD4-210ENST00000515266 POTEHQ6S545 545 aa11.03□□□□□ -0.64
MBD4-210ENST00000515266 PLCD3Q8N3E9 789 aa11.03□□□□□ -0.64
MBD4-210ENST00000515266 MNX1P50219 401 aaPredicted RBP11□□□□□ -0.65
MBD4-210ENST00000515266 FARP1Q9Y4F1 1045 aaPredicted RBP10.97□□□□□ -0.65
MBD4-210ENST00000515266 PLEKHG5O94827 1062 aa10.95□□□□□ -0.66
MBD4-210ENST00000515266 IFNLR1Q8IU57 520 aaPredicted RBP10.93□□□□□ -0.66
MBD4-210ENST00000515266 ZBTB47Q9UFB7 747 aaPredicted RBP10.89□□□□□ -0.67
MBD4-210ENST00000515266 NPM1P06748 294 aaKnown RBP eCLIP10.87□□□□□ -0.67
MBD4-210ENST00000515266 KLHL34Q8N239 644 aa10.86□□□□□ -0.67
MBD4-210ENST00000515266 C19orf67A6NJJ6 358 aa10.82□□□□□ -0.68
MBD4-210ENST00000515266 NUBP1P53384 320 aa10.82□□□□□ -0.68
MBD4-210ENST00000515266 SPOCK2Q92563 424 aa10.8□□□□□ -0.68
MBD4-210ENST00000515266 HAX1O00165 279 aa10.79□□□□□ -0.68
MBD4-210ENST00000515266 RASEFQ8IZ41 740 aa10.79□□□□□ -0.68
MBD4-210ENST00000515266 CD44P16070 742 aaKnown RBP10.77□□□□□ -0.69
MBD4-210ENST00000515266 EVX2Q03828 476 aa10.75□□□□□ -0.69
MBD4-210ENST00000515266 FAM212AQ96EL1 285 aa10.7□□□□□ -0.7
MBD4-210ENST00000515266 TSPYL2Q9H2G4 693 aaPredicted RBP10.7□□□□□ -0.7
MBD4-210ENST00000515266 ZRANB1Q9UGI0 708 aa10.69□□□□□ -0.7
MBD4-210ENST00000515266 PAK3O75914 559 aaPredicted RBP10.68□□□□□ -0.7
MBD4-210ENST00000515266 CCDC61Q9Y6R9 512 aa10.66□□□□□ -0.7
MBD4-210ENST00000515266 DCAF8Q5TAQ9 597 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms