RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 CPNE7Q9UBL6 633 aa16.96■□□□□ 0.31
CLDND1-221ENST00000510541 KCNK6Q9Y257 313 aa16.96■□□□□ 0.31
CLDND1-221ENST00000510541 UNC13CQ8NB66 2214 aa16.96■□□□□ 0.3
CLDND1-221ENST00000510541 PIKFYVEQ9Y2I7 2098 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 A0A1W2PQM1 296 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 RHPN2P1A8MT19 583 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 D6RAR5 112 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 PPM1DO15297 605 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 USP1O94782 785 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 CPNE6O95741 557 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 TTC4O95801 387 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 GOT2P00505 430 aaKnown RBP16.95■□□□□ 0.3
CLDND1-221ENST00000510541 BRAFP15056 766 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 PAMP19021 973 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 RPS3P23396 243 aaKnown RBP eCLIP16.95■□□□□ 0.3
CLDND1-221ENST00000510541 ARCN1P48444 511 aaKnown RBP16.95■□□□□ 0.3
CLDND1-221ENST00000510541 SESN2P58004 480 aaPredicted RBP16.95■□□□□ 0.3
CLDND1-221ENST00000510541 HHEXQ03014 270 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 TRA2AQ13595 282 aaKnown RBP eCLIP16.95■□□□□ 0.3
CLDND1-221ENST00000510541 SPIDRQ14159 915 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 FRG1Q14331 258 aaKnown RBP16.95■□□□□ 0.3
CLDND1-221ENST00000510541 TRIP13Q15645 432 aaPredicted RBP16.95■□□□□ 0.3
CLDND1-221ENST00000510541 CCDC38Q502W7 563 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 ZRANB3Q5FWF4 1079 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 ZNF648Q5T619 568 aaPredicted RBP16.95■□□□□ 0.3
CLDND1-221ENST00000510541 RNF187Q5TA31 235 aaPredicted RBP16.95■□□□□ 0.3
CLDND1-221ENST00000510541 ANKRD22Q5VYY1 191 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 WDR74Q6RFH5 385 aaPredicted RBP16.95■□□□□ 0.3
CLDND1-221ENST00000510541 CRTC3Q6UUV7 619 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 SYT10Q6XYQ8 523 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 BBOF1Q8ND07 529 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 SGF29Q96ES7 293 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 CAPZA3Q96KX2 299 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 SIGLEC10Q96LC7 697 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 PHACTR1Q9C0D0 580 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 RAB33BQ9H082 229 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 SLC40A1Q9NP59 571 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 ARFGAP3Q9NP61 516 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 PIH1D1Q9NWS0 290 aaKnown RBP16.95■□□□□ 0.3
CLDND1-221ENST00000510541 SLC2A6Q9UGQ3 507 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 RABGEF1Q9UJ41 708 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 VPS9D1Q9Y2B5 631 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 PRKAB1Q9Y478 270 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 PCDHGA8Q9Y5G5 932 aa16.95■□□□□ 0.3
CLDND1-221ENST00000510541 IGHV1OR21-1A0A087WYE8 117 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 LIN7AO14910 233 aaPredicted RBP16.94■□□□□ 0.3
CLDND1-221ENST00000510541 PFDN6O15212 129 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 B4GAT1O43505 415 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 TOP3BO95985 862 aaKnown RBP16.94■□□□□ 0.3
CLDND1-221ENST00000510541 FTH1P02794 183 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 OGNP20774 298 aaKnown RBP16.94■□□□□ 0.3
CLDND1-221ENST00000510541 MGAT1P26572 445 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 ARNTP27540 789 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 NDUFS1P28331 727 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 HALP42357 657 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 TMPRSS15P98073 1019 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 TARDBPQ13148 414 aaKnown RBP eCLIP16.94■□□□□ 0.3
CLDND1-221ENST00000510541 TYSND1Q2T9J0 566 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 FASTKD1Q53R41 847 aaKnown RBP16.94■□□□□ 0.3
CLDND1-221ENST00000510541 FNBP1LQ5T0N5 605 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 CAPRIN2Q6IMN6 1127 aaKnown RBP16.94■□□□□ 0.3
CLDND1-221ENST00000510541 MRNIPQ6NTE8 343 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 XKR5Q6UX68 686 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 LSMEM2Q8N112 164 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 GFM1Q96RP9 751 aaKnown RBP16.94■□□□□ 0.3
CLDND1-221ENST00000510541 CARD6Q9BX69 1037 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 SYBUQ9NX95 663 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.94■□□□□ 0.3
CLDND1-221ENST00000510541 SAMD15Q9P1V8 674 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 ASIC3Q9UHC3 531 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 CDC23Q9UJX2 597 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 ANAPC5Q9UJX4 755 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 HEBP2Q9Y5Z4 205 aa16.94■□□□□ 0.3
CLDND1-221ENST00000510541 AKAP13Q12802 2813 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 OR2AG2A6NM03 316 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 TP73O15350 636 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 EML2O95834 649 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 PROS1P07225 676 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 OR56A5P0C7T3 313 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 MYF5P13349 255 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 SLC19A1P41440 591 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 LSSP48449 732 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 VPS41P49754 854 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 CDKN1CP49918 316 aaPredicted RBP16.93■□□□□ 0.3
CLDND1-221ENST00000510541 DRG2P55039 364 aaKnown RBP16.93■□□□□ 0.3
CLDND1-221ENST00000510541 MAZP56270 477 aaKnown RBP16.93■□□□□ 0.3
CLDND1-221ENST00000510541 CCL7P80098 99 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 HIBCHQ6NVY1 386 aaPredicted RBP16.93■□□□□ 0.3
CLDND1-221ENST00000510541 TAS2R42Q7RTR8 314 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 SLITRK4Q8IW52 837 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 OR4D9Q8NGE8 314 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 OR6P1Q8NGX9 317 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 NXPE2Q96DL1 559 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 MFSD3Q96ES6 412 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 TSSK1BQ9BXA7 367 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 PRDM8Q9NQV8 689 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 LATS2Q9NRM7 1088 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 CATSPERZQ9NTU4 200 aa16.93■□□□□ 0.3
CLDND1-221ENST00000510541 ZNF624Q9P2J8 865 aaPredicted RBP16.93■□□□□ 0.3
CLDND1-221ENST00000510541 EPHA6Q9UF33 1036 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms