RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 HNRNPA1P09651 372 aaKnown RBP eCLIP5.06□□□□□ -1.6
CCNB3-208ENST00000493507 TMEM191BP0C7N4 346 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 ODC1P11926 461 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 WARSP23381 471 aaKnown RBP5.06□□□□□ -1.6
CCNB3-208ENST00000493507 NR2F2P24468 414 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 AKT1P31749 480 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 GCLMP48507 274 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 STX17P56962 302 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 C21orf58P58505 322 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 POU5F1Q01860 360 aaKnown RBP5.06□□□□□ -1.6
CCNB3-208ENST00000493507 SRSF4Q08170 494 aaKnown RBP5.06□□□□□ -1.6
CCNB3-208ENST00000493507 GPR17Q13304 367 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 SLC14A1Q13336 389 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 MYBPC2Q14324 1141 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 LPAL2Q16609 132 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 NFIL3Q16649 462 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 ZNF528Q3MIS6 628 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 ANKRD40Q6AI12 368 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 FAM171BQ6P995 826 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 CYP26C1Q6V0L0 522 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 DSTYKQ6XUX3 929 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 ZNF66Q6ZN08 573 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 RINLQ6ZS11 566 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 BHLHA9Q7RTU4 235 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 ZNF575Q86XF7 245 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 CD302Q8IX05 232 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 CEP57L1Q8IYX8 460 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 CACNA2D3Q8IZS8 1091 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 GALNT16Q8N428 558 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 CSGALNACT2Q8N6G5 542 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 LRRC52Q8N7C0 313 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 LMO3Q8TAP4 145 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 CLDN23Q96B33 292 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 MCRS1Q96EZ8 462 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 PCED1BQ96HM7 432 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 HPDLQ96IR7 371 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 ZFYVE19Q96K21 471 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 SYT15Q9BQS2 421 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 RTKNQ9BST9 563 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 EFHD1Q9BUP0 239 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 ELOVL4Q9GZR5 314 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 NUAK2Q9H093 628 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 TMEM206Q9H813 350 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 LTB4R2Q9NPC1 389 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 DDX43Q9NXZ2 648 aaKnown RBP5.06□□□□□ -1.6
CCNB3-208ENST00000493507 GTF3C4Q9UKN8 822 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 FBXO4Q9UKT5 387 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 CDH7Q9ULB5 785 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 EXOC7Q9UPT5 735 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 HEMK1Q9Y5R4 338 aaPredicted RBP5.06□□□□□ -1.6
CCNB3-208ENST00000493507 SIRT4Q9Y6E7 314 aaPredicted RBP5.06□□□□□ -1.6
CCNB3-208ENST00000493507 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.06□□□□□ -1.6
CCNB3-208ENST00000493507 SPAG17Q6Q759 2223 aa5.06□□□□□ -1.6
CCNB3-208ENST00000493507 ZNF233A6NK53 670 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 OR6C75A6NL08 312 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 EFCAB8A8MWE9 144 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 TULP2O00295 520 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 USP12O75317 370 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 ACTL6BO94805 426 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 TDGF1P13385 188 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 SCP2P22307 547 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 SLC8A1P32418 973 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 HOXD12P35452 270 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 NUCB2P80303 420 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 MRPS21P82921 87 aaKnown RBP5.05□□□□□ -1.6
CCNB3-208ENST00000493507 DMWDQ09019 674 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 SRSF5Q13243 272 aaKnown RBP5.05□□□□□ -1.6
CCNB3-208ENST00000493507 BECN1Q14457 450 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 ZNF268Q14587 947 aaPredicted RBP5.05□□□□□ -1.6
CCNB3-208ENST00000493507 MLF2Q15773 248 aaPredicted RBP5.05□□□□□ -1.6
CCNB3-208ENST00000493507 CAMK4Q16566 473 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 DPCR1Q3MIW9 517 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 GLE1Q53GS7 698 aaKnown RBP5.05□□□□□ -1.6
CCNB3-208ENST00000493507 AWAT1Q58HT5 328 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 MDH1BQ5I0G3 518 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 LIN9Q5TKA1 542 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 ZNF658Q5TYW1 1059 aaPredicted RBP5.05□□□□□ -1.6
CCNB3-208ENST00000493507 TPGS2Q68CL5 300 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 KLHL17Q6TDP4 642 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 CLEC17AQ6ZS10 378 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 C11orf57Q6ZUT1 292 aaPredicted RBP5.05□□□□□ -1.6
CCNB3-208ENST00000493507 CCDC117Q8IWD4 279 aaPredicted RBP5.05□□□□□ -1.6
CCNB3-208ENST00000493507 C12orf29Q8N999 325 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 NPIPB3Q92617 1050 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 SLC35C1Q96A29 364 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 REXO5Q96IC2 774 aaKnown RBP5.05□□□□□ -1.6
CCNB3-208ENST00000493507 ZNF560Q96MR9 790 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 SEPT5Q99719 369 aaPredicted RBP5.05□□□□□ -1.6
CCNB3-208ENST00000493507 HSD3B7Q9H2F3 369 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 HPS4Q9NQG7 708 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 HEBP1Q9NRV9 189 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 FAM49BQ9NUQ9 324 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 ARL8BQ9NVJ2 186 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 OSER1Q9NX31 292 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 GCNT4Q9P109 453 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 FRMD4BQ9Y2L6 1034 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 NUP205Q92621 2012 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 DMXL1Q9Y485 3027 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 CHD5Q8TDI0 1954 aa5.05□□□□□ -1.6
CCNB3-208ENST00000493507 CACNA1BQ00975 2339 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms