RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 GAB2Q9UQC2 676 aa4.87□□□□□ -1.63
CCDC39-206ENST00000489868 KIAA1210Q9ULL0 1709 aa4.86□□□□□ -1.63
CCDC39-206ENST00000489868 A0A1W2PPI3 338 aa4.86□□□□□ -1.63
CCDC39-206ENST00000489868 AP3D1O14617 1153 aa4.86□□□□□ -1.63
CCDC39-206ENST00000489868 TMCC2O75069 709 aa4.86□□□□□ -1.63
CCDC39-206ENST00000489868 ZBED4O75132 1171 aa4.86□□□□□ -1.63
CCDC39-206ENST00000489868 GJB3O75712 270 aa4.86□□□□□ -1.63
CCDC39-206ENST00000489868 PDE9AO76083 593 aa4.86□□□□□ -1.63
CCDC39-206ENST00000489868 NMBRP28336 390 aa4.86□□□□□ -1.63
CCDC39-206ENST00000489868 CRIP2P52943 208 aaPredicted RBP4.86□□□□□ -1.63
CCDC39-206ENST00000489868 MLLT10P55197 1068 aa4.86□□□□□ -1.63
CCDC39-206ENST00000489868 KIR2DS3Q14952 304 aa4.86□□□□□ -1.63
CCDC39-206ENST00000489868 CCNYL2Q5T2Q4 361 aa4.86□□□□□ -1.63
CCDC39-206ENST00000489868 AACSQ86V21 672 aa4.86□□□□□ -1.63
CCDC39-206ENST00000489868 LONP2Q86WA8 852 aa4.86□□□□□ -1.63
CCDC39-206ENST00000489868 FCAMRQ8WWV6 532 aa4.86□□□□□ -1.63
CCDC39-206ENST00000489868 SLA2Q9H6Q3 261 aa4.86□□□□□ -1.63
CCDC39-206ENST00000489868 DNAJC18Q9H819 358 aa4.86□□□□□ -1.63
CCDC39-206ENST00000489868 UPF2Q9HAU5 1272 aaKnown RBP4.86□□□□□ -1.63
CCDC39-206ENST00000489868 MAP3K20Q9NYL2 800 aaKnown RBP4.86□□□□□ -1.63
CCDC39-206ENST00000489868 YIPF1Q9Y548 306 aa4.86□□□□□ -1.63
CCDC39-206ENST00000489868 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.86□□□□□ -1.63
CCDC39-206ENST00000489868 BUD23O43709 281 aaKnown RBP4.85□□□□□ -1.63
CCDC39-206ENST00000489868 SH3BP5O60239 455 aa4.85□□□□□ -1.63
CCDC39-206ENST00000489868 MMP9P14780 707 aa4.85□□□□□ -1.63
CCDC39-206ENST00000489868 HOXD13P35453 343 aa4.85□□□□□ -1.63
CCDC39-206ENST00000489868 FAM205BPQ63HN1 556 aa4.85□□□□□ -1.63
CCDC39-206ENST00000489868 PACS1Q6VY07 963 aa4.85□□□□□ -1.63
CCDC39-206ENST00000489868 PTOV1Q86YD1 416 aa4.85□□□□□ -1.63
CCDC39-206ENST00000489868 PPP4R1Q8TF05 950 aa4.85□□□□□ -1.63
CCDC39-206ENST00000489868 SMPDL3BQ92485 455 aa4.85□□□□□ -1.63
CCDC39-206ENST00000489868 ZNF582Q96NG8 517 aaPredicted RBP4.85□□□□□ -1.63
CCDC39-206ENST00000489868 PPIL3Q9H2H8 161 aaKnown RBP4.85□□□□□ -1.63
CCDC39-206ENST00000489868 GHITMQ9H3K2 345 aa4.85□□□□□ -1.63
CCDC39-206ENST00000489868 ZNF696Q9H7X3 374 aa4.85□□□□□ -1.63
CCDC39-206ENST00000489868 PELI2Q9HAT8 420 aa4.85□□□□□ -1.63
CCDC39-206ENST00000489868 DNAJB4Q9UDY4 337 aa4.85□□□□□ -1.63
CCDC39-206ENST00000489868 KIF26BQ2KJY2 2108 aa4.85□□□□□ -1.63
CCDC39-206ENST00000489868 FSD2A1L4K1 749 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 PAPSS1O43252 624 aaPredicted RBP4.84□□□□□ -1.63
CCDC39-206ENST00000489868 MITFO75030 526 aaPredicted RBP4.84□□□□□ -1.63
CCDC39-206ENST00000489868 GAS8-AS1O95177 125 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 TSHBP01222 138 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 GH2P01242 217 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 PRLRP16471 622 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 MSH3P20585 1137 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 PSMB10P40306 273 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 DRG2P55039 364 aaKnown RBP4.84□□□□□ -1.63
CCDC39-206ENST00000489868 MRPS5P82675 430 aaKnown RBP4.84□□□□□ -1.63
CCDC39-206ENST00000489868 PRKAA1Q13131 559 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 DUSP28Q4G0W2 176 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 TECRLQ5HYJ1 363 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 OTUD3Q5T2D3 398 aaPredicted RBP4.84□□□□□ -1.63
CCDC39-206ENST00000489868 NDUFAF5Q5TEU4 345 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 ZDHHC20Q5W0Z9 365 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 SZRD1Q7Z422 152 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 ARID3BQ8IVW6 561 aaPredicted RBP4.84□□□□□ -1.63
CCDC39-206ENST00000489868 SEMA4DQ92854 862 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 SENP5Q96HI0 755 aaPredicted RBP4.84□□□□□ -1.63
CCDC39-206ENST00000489868 DACH2Q96NX9 599 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 C1QTNF1Q9BXJ1 281 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 MAF1Q9H063 256 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 SCRT2Q9NQ03 307 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 FAM118AQ9NWS6 357 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 WSB2Q9NYS7 404 aaPredicted RBP4.84□□□□□ -1.63
CCDC39-206ENST00000489868 PTTG2Q9NZH5 202 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 PCDHGA5Q9Y5G8 931 aa4.84□□□□□ -1.63
CCDC39-206ENST00000489868 A6NCN8 305 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 PMS2P5A8MQ11 134 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 FAM72CH0Y354 149 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 RSL1D1O76021 490 aaKnown RBP4.83□□□□□ -1.64
CCDC39-206ENST00000489868 PRSS1P07477 247 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 CBLP22681 906 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 CDKN1AP38936 164 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 MFAP4P55083 255 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 MC1RQ01726 317 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 CREB5Q02930 508 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 KCNC3Q14003 757 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 DUOXA1Q1HG43 343 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 MRGPRG-AS1Q2M3A8 158 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 RAB41Q5JT25 222 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 FAM72AQ5TYM5 149 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 ALS2CLQ60I27 953 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 FAM72DQ6L9T8 149 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 SLC27A1Q6PCB7 646 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 GSG1LQ6UXU4 331 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 C4orf50Q6ZRC1 276 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 FAM72BQ86X60 149 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 RDM1Q8NG50 284 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 OR10V1Q8NGI7 309 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 TBC1D16Q8TBP0 767 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 ZNF473Q8WTR7 871 aaKnown RBP4.83□□□□□ -1.64
CCDC39-206ENST00000489868 LRRC59Q96AG4 307 aaKnown RBP4.83□□□□□ -1.64
CCDC39-206ENST00000489868 FAM120BQ96EK7 910 aaKnown RBP4.83□□□□□ -1.64
CCDC39-206ENST00000489868 CEP295NLQ96MC4 621 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 TREX2Q9BQ50 279 aaPredicted RBP4.83□□□□□ -1.64
CCDC39-206ENST00000489868 PSD2Q9BQI7 771 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 HRH4Q9H3N8 390 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 SMARCAD1Q9H4L7 1026 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 APOBEC3GQ9HC16 384 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms