RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 MFSD3Q96ES6 412 aa16.3■□□□□ 0.2
HMGN1-214ENST00000482733 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.3■□□□□ 0.2
HMGN1-214ENST00000482733 LRRN3Q9H3W5 708 aa16.3■□□□□ 0.2
HMGN1-214ENST00000482733 RABGEF1Q9UJ41 708 aa16.3■□□□□ 0.2
HMGN1-214ENST00000482733 CDC23Q9UJX2 597 aa16.3■□□□□ 0.2
HMGN1-214ENST00000482733 ACSL5Q9ULC5 683 aa16.3■□□□□ 0.2
HMGN1-214ENST00000482733 TRBV23OR9-2A0A075B6M9 112 aa16.29■□□□□ 0.2
HMGN1-214ENST00000482733 NTN3O00634 580 aaPredicted RBP16.29■□□□□ 0.2
HMGN1-214ENST00000482733 PFDN6O15212 129 aa16.29■□□□□ 0.2
HMGN1-214ENST00000482733 PPM1DO15297 605 aa16.29■□□□□ 0.2
HMGN1-214ENST00000482733 CD3EAPO15446 510 aaKnown RBP16.29■□□□□ 0.2
HMGN1-214ENST00000482733 RPLP0P05388 317 aaKnown RBP16.29■□□□□ 0.2
HMGN1-214ENST00000482733 XRCC1P18887 633 aaPredicted RBP16.29■□□□□ 0.2
HMGN1-214ENST00000482733 TTPAP49638 278 aa16.29■□□□□ 0.2
HMGN1-214ENST00000482733 CCL7P80098 99 aa16.29■□□□□ 0.2
HMGN1-214ENST00000482733 HHEXQ03014 270 aa16.29■□□□□ 0.2
HMGN1-214ENST00000482733 TARDBPQ13148 414 aaKnown RBP eCLIP16.29■□□□□ 0.2
HMGN1-214ENST00000482733 TUBB2AQ13885 445 aa16.29■□□□□ 0.2
HMGN1-214ENST00000482733 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.29■□□□□ 0.2
HMGN1-214ENST00000482733 METRNLQ641Q3 311 aa16.29■□□□□ 0.2
HMGN1-214ENST00000482733 KIAA0930Q6ICG6 404 aaPredicted RBP16.29■□□□□ 0.2
HMGN1-214ENST00000482733 MRNIPQ6NTE8 343 aa16.29■□□□□ 0.2
HMGN1-214ENST00000482733 Q8N9G6 341 aaPredicted RBP16.29■□□□□ 0.2
HMGN1-214ENST00000482733 BBOF1Q8ND07 529 aa16.29■□□□□ 0.2
HMGN1-214ENST00000482733 HM13Q8TCT9 377 aa16.29■□□□□ 0.2
HMGN1-214ENST00000482733 SNF8Q96H20 258 aa16.29■□□□□ 0.2
HMGN1-214ENST00000482733 GFM1Q96RP9 751 aaKnown RBP16.29■□□□□ 0.2
HMGN1-214ENST00000482733 SLC38A3Q99624 504 aa16.29■□□□□ 0.2
HMGN1-214ENST00000482733 CCM2Q9BSQ5 444 aa16.29■□□□□ 0.2
HMGN1-214ENST00000482733 TUBB2BQ9BVA1 445 aa16.29■□□□□ 0.2
HMGN1-214ENST00000482733 SYNDIG1Q9H7V2 258 aa16.29■□□□□ 0.2
HMGN1-214ENST00000482733 CPNE7Q9UBL6 633 aa16.29■□□□□ 0.2
HMGN1-214ENST00000482733 SPEGQ15772 3267 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 FAM149AA5PLN7 773 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 EFCAB8A8MWE9 144 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 TMX2-CTNND1H3BSU7 103 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 URI1O94763 535 aaPredicted RBP16.28■□□□□ 0.2
HMGN1-214ENST00000482733 VAPBO95292 243 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 VIPP01282 170 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 OR56A5P0C7T3 313 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 RPL10P27635 214 aaKnown RBP16.28■□□□□ 0.2
HMGN1-214ENST00000482733 ALDH4A1P30038 563 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 PBLDP30039 288 aaPredicted RBP16.28■□□□□ 0.2
HMGN1-214ENST00000482733 UBE2IP63279 158 aaKnown RBP16.28■□□□□ 0.2
HMGN1-214ENST00000482733 NFE2L1Q14494 772 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 SEPT7Q16181 437 aaKnown RBP16.28■□□□□ 0.2
HMGN1-214ENST00000482733 WHAMMP3Q1A5X7 153 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 ANKRD20A4Q4UJ75 823 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 ZNF449Q6P9G9 518 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 SDCCAG8Q86SQ7 713 aaPredicted RBP16.28■□□□□ 0.2
HMGN1-214ENST00000482733 TMEM135Q86UB9 458 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 TRIM48Q8IWZ4 208 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 RBM12BQ8IXT5 1001 aaKnown RBP16.28■□□□□ 0.2
HMGN1-214ENST00000482733 CLDN19Q8N6F1 224 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 SIGLEC10Q96LC7 697 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 TRIM51Q9BSJ1 452 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 NAT9Q9BTE0 207 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 UCK1Q9HA47 277 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 POT1Q9NUX5 634 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 MAD1L1Q9Y6D9 718 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 RPS6KL1Q9Y6S9 549 aa16.28■□□□□ 0.2
HMGN1-214ENST00000482733 A0A1W2PQM1 296 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 B4GAT1O43505 415 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 CSO75390 466 aaKnown RBP16.27■□□□□ 0.2
HMGN1-214ENST00000482733 USP1O94782 785 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 SEC31AO94979 1220 aaKnown RBP16.27■□□□□ 0.2
HMGN1-214ENST00000482733 FTH1P02794 183 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 POLBP06746 335 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 BRAFP15056 766 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 EPHA4P54764 986 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 DRG2P55039 364 aaKnown RBP16.27■□□□□ 0.2
HMGN1-214ENST00000482733 CLDN6P56747 220 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 OR1D5P58170 312 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 GPLD1P80108 840 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 C2orf54Q08AI8 447 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 RPA4Q13156 261 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 ISXQ2M1V0 245 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 RNF187Q5TA31 235 aaPredicted RBP16.27■□□□□ 0.2
HMGN1-214ENST00000482733 HIBCHQ6NVY1 386 aaPredicted RBP16.27■□□□□ 0.2
HMGN1-214ENST00000482733 CES3Q6UWW8 571 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 FAM83HQ6ZRV2 1179 aaPredicted RBP16.27■□□□□ 0.2
HMGN1-214ENST00000482733 MICALCLQ6ZW33 695 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 LRRC6Q86X45 466 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 CFAP206Q8IYR0 622 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 PDIK1LQ8N165 341 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 OTUD6BQ8N6M0 293 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 ZNF592Q92610 1267 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 ZNF669Q96BR6 464 aaPredicted RBP16.27■□□□□ 0.2
HMGN1-214ENST00000482733 CXorf40BQ96DE9 158 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 CCDC97Q96F63 343 aaPredicted RBP16.27■□□□□ 0.2
HMGN1-214ENST00000482733 STAMBPL1Q96FJ0 436 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 TCF12Q99081 682 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 DPYSL5Q9BPU6 564 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 ERP44Q9BS26 406 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 TSSK1BQ9BXA7 367 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 EPB41L1Q9H4G0 881 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 KCNK4Q9NYG8 393 aa16.27■□□□□ 0.2
HMGN1-214ENST00000482733 SCHIP1Q9P0W5 487 aaPredicted RBP16.27■□□□□ 0.2
HMGN1-214ENST00000482733 GOLGA4Q13439 2230 aaKnown RBP16.27■□□□□ 0.19
HMGN1-214ENST00000482733 D6RAR5 112 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms