RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 TNNT1P13805 278 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 NR1D1P20393 614 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 COMTP21964 271 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 FECHP22830 423 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 SLC1A1P43005 524 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 ERV3-1Q14264 604 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 LLGL1Q15334 1064 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 CHRNA6Q15825 494 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 RPE65Q16518 533 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 LACTB2Q53H82 288 aaPredicted RBP16.37■□□□□ 0.21
TRIM13-208ENST00000478111 IRGCQ6NXR0 463 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 CLEC18BQ6UXF7 455 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 TMEM135Q86UB9 458 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 AMZ2Q86W34 360 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 CLEC18CQ8NCF0 446 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 GDAP1Q8TB36 358 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 TFB1MQ8WVM0 346 aaKnown RBP16.37■□□□□ 0.21
TRIM13-208ENST00000478111 STAMBPL1Q96FJ0 436 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 OXNAD1Q96HP4 312 aaPredicted RBP16.37■□□□□ 0.21
TRIM13-208ENST00000478111 SLC41A2Q96JW4 573 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 TRABDQ9H4I3 376 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 AKIRIN1Q9H9L7 192 aaPredicted RBP16.37■□□□□ 0.21
TRIM13-208ENST00000478111 TP53TG5Q9Y2B4 290 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 PCDHB3Q9Y5E6 796 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 PCDHGA6Q9Y5G7 932 aa16.37■□□□□ 0.21
TRIM13-208ENST00000478111 CST8O60676 142 aa16.36■□□□□ 0.21
TRIM13-208ENST00000478111 POP7O75817 140 aaKnown RBP16.36■□□□□ 0.21
TRIM13-208ENST00000478111 TPM3P06753 285 aa16.36■□□□□ 0.21
TRIM13-208ENST00000478111 FOLR1P15328 257 aa16.36■□□□□ 0.21
TRIM13-208ENST00000478111 VCLP18206 1134 aa16.36■□□□□ 0.21
TRIM13-208ENST00000478111 SPAM1P38567 509 aa16.36■□□□□ 0.21
TRIM13-208ENST00000478111 GTF2H3Q13889 308 aa16.36■□□□□ 0.21
TRIM13-208ENST00000478111 SEPT6Q14141 434 aa16.36■□□□□ 0.21
TRIM13-208ENST00000478111 TRIM14Q14142 442 aa16.36■□□□□ 0.21
TRIM13-208ENST00000478111 UBAP2LQ14157 1087 aaKnown RBP16.36■□□□□ 0.21
TRIM13-208ENST00000478111 CERS6Q6ZMG9 384 aa16.36■□□□□ 0.21
TRIM13-208ENST00000478111 BZW1Q7L1Q6 419 aaKnown RBP16.36■□□□□ 0.21
TRIM13-208ENST00000478111 PPP1R3BQ86XI6 285 aa16.36■□□□□ 0.21
TRIM13-208ENST00000478111 ZNF567Q8N184 647 aa16.36■□□□□ 0.21
TRIM13-208ENST00000478111 SLC25A41Q8N5S1 370 aa16.36■□□□□ 0.21
TRIM13-208ENST00000478111 DDHD1Q8NEL9 900 aa16.36■□□□□ 0.21
TRIM13-208ENST00000478111 CCDC42Q96M95 316 aa16.36■□□□□ 0.21
TRIM13-208ENST00000478111 FCRL5Q96RD9 977 aa16.36■□□□□ 0.21
TRIM13-208ENST00000478111 LHX9Q9NQ69 397 aa16.36■□□□□ 0.21
TRIM13-208ENST00000478111 LNPEPQ9UIQ6 1025 aa16.36■□□□□ 0.21
TRIM13-208ENST00000478111 PADI1Q9ULC6 663 aa16.36■□□□□ 0.21
TRIM13-208ENST00000478111 PSMD13Q9UNM6 376 aa16.36■□□□□ 0.21
TRIM13-208ENST00000478111 BUD23O43709 281 aaKnown RBP16.35■□□□□ 0.21
TRIM13-208ENST00000478111 KATNA1O75449 491 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 CREG1O75629 220 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 RECKO95980 971 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 HALP42357 657 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 KLRB1Q12918 225 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 DNASE1L3Q13609 305 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 TFDP2Q14188 446 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 NFE2L1Q14494 772 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 KCNAB1Q14722 419 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 SLC1A5Q15758 541 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 LDLRAP1Q5SW96 308 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 GPRC6AQ5T6X5 926 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 ZDHHC20Q5W0Z9 365 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 PWWP2BQ6NUJ5 590 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 TCTN3Q6NUS6 607 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 TMEM220Q6QAJ8 160 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 FAM151BQ6UXP7 276 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 SPOCD1Q6ZMY3 1216 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 VSTM4Q8IW00 320 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 CT55Q8WUE5 264 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 UBXN4Q92575 508 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 TTC25Q96NG3 672 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 RUFY1Q96T51 708 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 ZNHIT6Q9NWK9 470 aaKnown RBP16.35■□□□□ 0.21
TRIM13-208ENST00000478111 HACD3Q9P035 362 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 ANKMY1Q9P2S6 941 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 KCND3Q9UK17 655 aa16.35■□□□□ 0.21
TRIM13-208ENST00000478111 DNMT3AQ9Y6K1 912 aaPredicted RBP16.35■□□□□ 0.21
TRIM13-208ENST00000478111 GLYATL1P3A0A0U1RQE8 302 aa16.34■□□□□ 0.21
TRIM13-208ENST00000478111 F5H423 210 aaPredicted RBP16.34■□□□□ 0.21
TRIM13-208ENST00000478111 MFAP3LO75121 409 aa16.34■□□□□ 0.21
TRIM13-208ENST00000478111 CCNYL3P0C7X3 344 aa16.34■□□□□ 0.21
TRIM13-208ENST00000478111 PTPRCAPQ14761 206 aa16.34■□□□□ 0.21
TRIM13-208ENST00000478111 ODF2Q5BJF6 829 aa16.34■□□□□ 0.21
TRIM13-208ENST00000478111 METRNLQ641Q3 311 aa16.34■□□□□ 0.21
TRIM13-208ENST00000478111 KAZNQ674X7 775 aa16.34■□□□□ 0.21
TRIM13-208ENST00000478111 ZC3H18Q86VM9 953 aaKnown RBP16.34■□□□□ 0.21
TRIM13-208ENST00000478111 BLOC1S5Q8TDH9 187 aa16.34■□□□□ 0.21
TRIM13-208ENST00000478111 MIB2Q96AX9 1013 aa16.34■□□□□ 0.21
TRIM13-208ENST00000478111 FCRL4Q96PJ5 515 aa16.34■□□□□ 0.21
TRIM13-208ENST00000478111 INSM2Q96T92 566 aaPredicted RBP16.34■□□□□ 0.21
TRIM13-208ENST00000478111 MAP3K3Q99759 626 aa16.34■□□□□ 0.21
TRIM13-208ENST00000478111 GOLPH3Q9H4A6 298 aa16.34■□□□□ 0.21
TRIM13-208ENST00000478111 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.34■□□□□ 0.21
TRIM13-208ENST00000478111 TLK1Q9UKI8 766 aa16.34■□□□□ 0.21
TRIM13-208ENST00000478111 INTUQ9ULD6 942 aa16.34■□□□□ 0.21
TRIM13-208ENST00000478111 POLHQ9Y253 713 aa16.34■□□□□ 0.21
TRIM13-208ENST00000478111 PLAAQ9Y263 795 aa16.34■□□□□ 0.21
TRIM13-208ENST00000478111 ALG6Q9Y672 507 aa16.34■□□□□ 0.21
TRIM13-208ENST00000478111 hCG_1818297A0A087WSY0 165 aa16.33■□□□□ 0.2
TRIM13-208ENST00000478111 CDC14CA4D256 554 aa16.33■□□□□ 0.2
TRIM13-208ENST00000478111 OR2AG2A6NM03 316 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms