RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 SNF8Q96H20 258 aa15.02■□□□□ -0
SDC3-203ENST00000471567 SIGLEC10Q96LC7 697 aa15.02■□□□□ -0
SDC3-203ENST00000471567 TRIM51Q9BSJ1 452 aa15.02■□□□□ -0
SDC3-203ENST00000471567 TUBB2BQ9BVA1 445 aa15.02■□□□□ -0
SDC3-203ENST00000471567 STN1Q9H668 368 aaKnown RBP15.02■□□□□ -0
SDC3-203ENST00000471567 VPS37BQ9H9H4 285 aa15.02■□□□□ -0
SDC3-203ENST00000471567 SARS2Q9NP81 518 aaKnown RBP15.02■□□□□ -0
SDC3-203ENST00000471567 CATSPERZQ9NTU4 200 aa15.02■□□□□ -0
SDC3-203ENST00000471567 RABGEF1Q9UJ41 708 aa15.02■□□□□ -0
SDC3-203ENST00000471567 ACSL5Q9ULC5 683 aa15.02■□□□□ -0
SDC3-203ENST00000471567 CLCA2Q9UQC9 943 aa15.02■□□□□ -0
SDC3-203ENST00000471567 RP1P56715 2156 aa15.02□□□□□ -0.01
SDC3-203ENST00000471567 TRBV23OR9-2A0A075B6M9 112 aa15.01□□□□□ -0.01
SDC3-203ENST00000471567 PDZK1P1A8MUH7 402 aa15.01□□□□□ -0.01
SDC3-203ENST00000471567 EFCAB8A8MWE9 144 aa15.01□□□□□ -0.01
SDC3-203ENST00000471567 PPM1DO15297 605 aa15.01□□□□□ -0.01
SDC3-203ENST00000471567 CD3EAPO15446 510 aaKnown RBP15.01□□□□□ -0.01
SDC3-203ENST00000471567 SEC31AO94979 1220 aaKnown RBP15.01□□□□□ -0.01
SDC3-203ENST00000471567 VAPBO95292 243 aa15.01□□□□□ -0.01
SDC3-203ENST00000471567 XRCC1P18887 633 aaPredicted RBP15.01□□□□□ -0.01
SDC3-203ENST00000471567 SPINK2P20155 84 aa15.01□□□□□ -0.01
SDC3-203ENST00000471567 TTPAP49638 278 aa15.01□□□□□ -0.01
SDC3-203ENST00000471567 C2orf54Q08AI8 447 aa15.01□□□□□ -0.01
SDC3-203ENST00000471567 CLPPQ16740 277 aaPredicted RBP15.01□□□□□ -0.01
SDC3-203ENST00000471567 ANKRD20A4Q4UJ75 823 aa15.01□□□□□ -0.01
SDC3-203ENST00000471567 DNAJC21Q5F1R6 531 aaKnown RBP15.01□□□□□ -0.01
SDC3-203ENST00000471567 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.01□□□□□ -0.01
SDC3-203ENST00000471567 HIBCHQ6NVY1 386 aaPredicted RBP15.01□□□□□ -0.01
SDC3-203ENST00000471567 CES3Q6UWW8 571 aa15.01□□□□□ -0.01
SDC3-203ENST00000471567 MICALCLQ6ZW33 695 aa15.01□□□□□ -0.01
SDC3-203ENST00000471567 SPRED1Q7Z699 444 aa15.01□□□□□ -0.01
SDC3-203ENST00000471567 CCNJLQ8IV13 435 aa15.01□□□□□ -0.01
SDC3-203ENST00000471567 HM13Q8TCT9 377 aa15.01□□□□□ -0.01
SDC3-203ENST00000471567 ZNF592Q92610 1267 aa15.01□□□□□ -0.01
SDC3-203ENST00000471567 GRAMD1AQ96CP6 724 aa15.01□□□□□ -0.01
SDC3-203ENST00000471567 CCM2Q9BSQ5 444 aa15.01□□□□□ -0.01
SDC3-203ENST00000471567 LRRN3Q9H3W5 708 aa15.01□□□□□ -0.01
SDC3-203ENST00000471567 CPNE7Q9UBL6 633 aa15.01□□□□□ -0.01
SDC3-203ENST00000471567 PTPRBP23467 1997 aa15□□□□□ -0.01
SDC3-203ENST00000471567 USP1O94782 785 aa15□□□□□ -0.01
SDC3-203ENST00000471567 RPLP0P05388 317 aaKnown RBP15□□□□□ -0.01
SDC3-203ENST00000471567 BRAFP15056 766 aa15□□□□□ -0.01
SDC3-203ENST00000471567 ARNTP27540 789 aa15□□□□□ -0.01
SDC3-203ENST00000471567 PBLDP30039 288 aaPredicted RBP15□□□□□ -0.01
SDC3-203ENST00000471567 HALP42357 657 aa15□□□□□ -0.01
SDC3-203ENST00000471567 ARCN1P48444 511 aaKnown RBP15□□□□□ -0.01
SDC3-203ENST00000471567 ITGA8P53708 1063 aa15□□□□□ -0.01
SDC3-203ENST00000471567 UBE2IP63279 158 aaKnown RBP15□□□□□ -0.01
SDC3-203ENST00000471567 CCL7P80098 99 aa15□□□□□ -0.01
SDC3-203ENST00000471567 HHEXQ03014 270 aa15□□□□□ -0.01
SDC3-203ENST00000471567 SPIDRQ14159 915 aa15□□□□□ -0.01
SDC3-203ENST00000471567 NFE2L1Q14494 772 aa15□□□□□ -0.01
SDC3-203ENST00000471567 SEMA3AQ14563 771 aa15□□□□□ -0.01
SDC3-203ENST00000471567 MRNIPQ6NTE8 343 aa15□□□□□ -0.01
SDC3-203ENST00000471567 RBM44Q6ZP01 1051 aaKnown RBP15□□□□□ -0.01
SDC3-203ENST00000471567 FAM83HQ6ZRV2 1179 aaPredicted RBP15□□□□□ -0.01
SDC3-203ENST00000471567 SDCCAG8Q86SQ7 713 aaPredicted RBP15□□□□□ -0.01
SDC3-203ENST00000471567 PDIK1LQ8N165 341 aa15□□□□□ -0.01
SDC3-203ENST00000471567 CLDN19Q8N6F1 224 aa15□□□□□ -0.01
SDC3-203ENST00000471567 Q8N9G6 341 aaPredicted RBP15□□□□□ -0.01
SDC3-203ENST00000471567 GPR150Q8NGU9 434 aa15□□□□□ -0.01
SDC3-203ENST00000471567 STAMBPL1Q96FJ0 436 aa15□□□□□ -0.01
SDC3-203ENST00000471567 DEPDC7Q96QD5 511 aa15□□□□□ -0.01
SDC3-203ENST00000471567 GFM1Q96RP9 751 aaKnown RBP15□□□□□ -0.01
SDC3-203ENST00000471567 TCF12Q99081 682 aa15□□□□□ -0.01
SDC3-203ENST00000471567 ERP44Q9BS26 406 aa15□□□□□ -0.01
SDC3-203ENST00000471567 NAT9Q9BTE0 207 aa15□□□□□ -0.01
SDC3-203ENST00000471567 LDHAL6BQ9BYZ2 381 aaPredicted RBP15□□□□□ -0.01
SDC3-203ENST00000471567 UCK1Q9HA47 277 aa15□□□□□ -0.01
SDC3-203ENST00000471567 SCHIP1Q9P0W5 487 aaPredicted RBP15□□□□□ -0.01
SDC3-203ENST00000471567 MAD1L1Q9Y6D9 718 aa15□□□□□ -0.01
SDC3-203ENST00000471567 RPS6KL1Q9Y6S9 549 aa15□□□□□ -0.01
SDC3-203ENST00000471567 ZCWPW2A0A1B0GU75 182 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 A0A1W2PQM1 296 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 PFDN6O15212 129 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 RAD51CO43502 376 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 B4GAT1O43505 415 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 FTH1P02794 183 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 POLBP06746 335 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 OR56A5P0C7T3 313 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 RPL10P27635 214 aaKnown RBP14.99□□□□□ -0.01
SDC3-203ENST00000471567 SLC19A1P41440 591 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 RPL21P46778 160 aaKnown RBP14.99□□□□□ -0.01
SDC3-203ENST00000471567 DRG2P55039 364 aaKnown RBP14.99□□□□□ -0.01
SDC3-203ENST00000471567 CLDN6P56747 220 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 TARDBPQ13148 414 aaKnown RBP eCLIP14.99□□□□□ -0.01
SDC3-203ENST00000471567 SQSTM1Q13501 440 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 SEPT7Q16181 437 aaKnown RBP14.99□□□□□ -0.01
SDC3-203ENST00000471567 ZNF449Q6P9G9 518 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 RBM12BQ8IXT5 1001 aaKnown RBP14.99□□□□□ -0.01
SDC3-203ENST00000471567 CFAP206Q8IYR0 622 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 AGGF1Q8N302 714 aaeCLIP14.99□□□□□ -0.01
SDC3-203ENST00000471567 KIF18AQ8NI77 898 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 NAT14Q8WUY8 206 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 ZNF669Q96BR6 464 aaPredicted RBP14.99□□□□□ -0.01
SDC3-203ENST00000471567 LRRC39Q96DD0 335 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 FCRL3Q96P31 734 aaPredicted RBP14.99□□□□□ -0.01
SDC3-203ENST00000471567 SLC38A3Q99624 504 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 TRIM31Q9BZY9 425 aa14.99□□□□□ -0.01
SDC3-203ENST00000471567 POT1Q9NUX5 634 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms