RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 MYBPC3Q14896 1274 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 CLEC16AQ2KHT3 1053 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 SMTNL2Q2TAL5 461 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 ANKRD20A8PQ5CZ79 823 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 MIIPQ5JXC2 388 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 PLEKHS1Q5SXH7 462 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 MRGPRGQ86SM5 289 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 MRGPREQ86SM8 312 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 ADGRG6Q86SQ4 1221 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 CDH24Q86UP0 819 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 BPHLQ86WA6 291 aaPredicted RBP6.72□□□□□ -1.33
HDAC1-204ENST00000471488 OOSP2Q86WS3 158 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 DSELQ8IZU8 1212 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 MMP21Q8N119 569 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 GLIS1Q8NBF1 620 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 GPR150Q8NGU9 434 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 LRRN4Q8WUT4 740 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 SLC41A2Q96JW4 573 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 PPM1MQ96MI6 270 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 ZNF599Q96NL3 588 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 FCRL4Q96PJ5 515 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 PEBP4Q96S96 227 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 WDR77Q9BQA1 342 aaPredicted RBP6.72□□□□□ -1.33
HDAC1-204ENST00000471488 POLR1EQ9GZS1 481 aaKnown RBP6.72□□□□□ -1.33
HDAC1-204ENST00000471488 CHST11Q9NPF2 352 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 LATS2Q9NRM7 1088 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 OLAHQ9NV23 265 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 TAB2Q9NYJ8 693 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 CWC15Q9P013 229 aaKnown RBP6.72□□□□□ -1.33
HDAC1-204ENST00000471488 TMEM63CQ9P1W3 806 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 NDOR1Q9UHB4 597 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 NOVA2Q9UNW9 492 aaKnown RBP6.72□□□□□ -1.33
HDAC1-204ENST00000471488 SHOC2Q9UQ13 582 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 WDR37Q9Y2I8 494 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 AKAP9Q99996 3911 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 PDZD2O15018 2839 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 A0A1B0GTL3 188 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 TLCD2A6NGC4 264 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 SLC9B1P1A6NJY1 282 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 CCL21O00585 134 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 KLHL41O60662 606 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 MAFKO60675 156 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 JRKO75564 520 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 ZBTB11O95625 1053 aaPredicted RBP6.71□□□□□ -1.34
HDAC1-204ENST00000471488 JCHAINP01591 159 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 UNGP13051 313 aaPredicted RBP6.71□□□□□ -1.34
HDAC1-204ENST00000471488 EDN3P14138 238 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 BPIP17213 487 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 POLR2CP19387 275 aaPredicted RBP6.71□□□□□ -1.34
HDAC1-204ENST00000471488 FECHP22830 423 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 PTGER4P35408 488 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 SOX5P35711 763 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 GJC1P36383 396 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 LMAN1P49257 510 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 CLCNKAP51800 687 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 CDH6P55285 790 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 OGDHQ02218 1023 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 ABRQ12979 859 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 PRKAA1Q13131 559 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 LAMB3Q13751 1172 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 GALNT3Q14435 633 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 NCF4Q15080 339 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 DCAF10Q5QP82 559 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 ZFYVE27Q5T4F4 411 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 HENMT1Q5T8I9 393 aaKnown RBP6.71□□□□□ -1.34
HDAC1-204ENST00000471488 DUS1LQ6P1R4 473 aaKnown RBP6.71□□□□□ -1.34
HDAC1-204ENST00000471488 FAM198BQ6UWH4 519 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 GFRALQ6UXV0 394 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 LINC00696Q6ZRV3 163 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 B4GALNT4Q76KP1 1039 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 RBM12BQ8IXT5 1001 aaKnown RBP6.71□□□□□ -1.34
HDAC1-204ENST00000471488 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.71□□□□□ -1.34
HDAC1-204ENST00000471488 CHTF18Q8WVB6 975 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 FAR1Q8WVX9 515 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 ZNF501Q96CX3 271 aaPredicted RBP6.71□□□□□ -1.34
HDAC1-204ENST00000471488 ZNF552Q9H707 407 aaPredicted RBP6.71□□□□□ -1.34
HDAC1-204ENST00000471488 PCDH9Q9HC56 1237 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 TRIM39Q9HCM9 518 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 PCMTD2Q9NV79 361 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 ETNK2Q9NVF9 386 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 P4HTMQ9NXG6 502 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 IFT80Q9P2H3 777 aaPredicted RBP6.71□□□□□ -1.34
HDAC1-204ENST00000471488 SERTAD3Q9UJW9 196 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 DNPEPQ9ULA0 475 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 NF1P21359 2839 aa6.71□□□□□ -1.34
HDAC1-204ENST00000471488 PIKFYVEQ9Y2I7 2098 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 OR5K3A6NET4 321 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 E7EQ34 232 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 E2F3O00716 465 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 ZNF749O43361 778 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 PRICKLE3O43900 615 aaPredicted RBP6.7□□□□□ -1.34
HDAC1-204ENST00000471488 ESRRAP11474 423 aaPredicted RBP6.7□□□□□ -1.34
HDAC1-204ENST00000471488 MIPP30301 263 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 CD86P42081 329 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 ZNF165P49910 485 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 KPNA2P52292 529 aaKnown RBP6.7□□□□□ -1.34
HDAC1-204ENST00000471488 KRTAP10-9P60411 292 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 ADCY2Q08462 1091 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 ART3Q13508 389 aa6.7□□□□□ -1.34
HDAC1-204ENST00000471488 DPYSQ14117 519 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms