RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 ADCK1Q86TW2 530 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 EXOC3L1Q86VI1 746 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 SFR1Q86XK3 245 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 ZNF441Q8N8Z8 693 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 POGLUT1Q8NBL1 392 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 CADM4Q8NFZ8 388 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 SPATA22Q8NHS9 363 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 NEK9Q8TD19 979 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 SORCS1Q8WY21 1168 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 PTP4A1Q93096 173 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 PABPC5Q96DU9 382 aaKnown RBP3.72□□□□□ -1.81
VPS50-209ENST00000467326 PGAP3Q96FM1 320 aaPredicted RBP3.72□□□□□ -1.81
VPS50-209ENST00000467326 CCDC114Q96M63 670 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 AK8Q96MA6 479 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 ATP6V0BQ99437 205 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 TEX13BQ9BXU2 312 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 TKTL2Q9H0I9 626 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 NT5C3AQ9H0P0 336 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 RANBP17Q9H2T7 1088 aaKnown RBP3.72□□□□□ -1.81
VPS50-209ENST00000467326 NDST4Q9H3R1 872 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 PLEKHA4Q9H4M7 779 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 UBTD1Q9HAC8 227 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 FANCFQ9NPI8 374 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 MCM9Q9NXL9 1143 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 DONSONQ9NYP3 566 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 EHD2Q9NZN4 543 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 AKAP7Q9P0M2 348 aaPredicted RBP3.72□□□□□ -1.81
VPS50-209ENST00000467326 MARCH4Q9P2E8 410 aaPredicted RBP3.72□□□□□ -1.81
VPS50-209ENST00000467326 ZNF624Q9P2J8 865 aaPredicted RBP3.72□□□□□ -1.81
VPS50-209ENST00000467326 SUCLA2Q9P2R7 463 aaPredicted RBP3.72□□□□□ -1.81
VPS50-209ENST00000467326 PCSK1NQ9UHG2 260 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 HPCAL4Q9UM19 191 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 SPAG9O60271 1321 aaKnown RBP3.71□□□□□ -1.81
VPS50-209ENST00000467326 A0A087WYN8 130 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 RNF103-CHMP3A0A140T963 221 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 A0A1W2PQ09 198 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 CCDC169A6NNP5 214 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 PRAC2D3DTV9 90 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 H0YC42 278 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 SNAP23O00161 211 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 RNF103O00237 685 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 MCF2LO15068 1137 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 PGRMC2O15173 223 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 MID1O15344 667 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 IGKV3-20P01619 116 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 SRCP12931 536 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 AMD1P17707 334 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 DDX5P17844 614 aaKnown RBP3.71□□□□□ -1.82
VPS50-209ENST00000467326 MAOAP21397 527 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 KCNA5P22460 613 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 BSGP35613 385 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 HARS2P49590 506 aaKnown RBP3.71□□□□□ -1.82
VPS50-209ENST00000467326 CLCNKAP51800 687 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 PPP5CP53041 499 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 BRWD1-AS2P59051 145 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 PRAMEP78395 509 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 ARF5P84085 180 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 SCN1BQ07699 218 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 HYAL1Q12794 435 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 PTP4A2Q12974 167 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 ALG11Q2TAA5 492 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 C9orf152Q5JTZ5 239 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 KCTD18Q6PI47 426 aaPredicted RBP3.71□□□□□ -1.82
VPS50-209ENST00000467326 TUBA1AQ71U36 451 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 TAOK1Q7L7X3 1001 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 ZER1Q7Z7L7 766 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 ADGRA1Q86SQ6 560 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 DNAAF5Q86Y56 855 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 FOXRED2Q8IWF2 684 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 FRMD1Q8N878 549 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 SYT2Q8N9I0 419 aaPredicted RBP3.71□□□□□ -1.82
VPS50-209ENST00000467326 TDRD5Q8NAT2 981 aaKnown RBP3.71□□□□□ -1.82
VPS50-209ENST00000467326 POC1AQ8NBT0 407 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 KIF18AQ8NI77 898 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 WFIKKN2Q8TEU8 576 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 FIG4Q92562 907 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 RND1Q92730 232 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 PPP1R13BQ96KQ4 1090 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 TUBA1CQ9BQE3 449 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 GLIS2Q9BZE0 524 aaPredicted RBP3.71□□□□□ -1.82
VPS50-209ENST00000467326 SPRY4Q9C004 299 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 PPP1R3EQ9H7J1 279 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 EVA1AQ9H8M9 152 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 VPS37BQ9H9H4 285 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 BRF2Q9HAW0 419 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 MID1IP1Q9NPA3 183 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 GPR108Q9NPR9 543 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 TCF7L2Q9NQB0 619 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 GIMAP4Q9NUV9 329 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 CWC15Q9P013 229 aaKnown RBP3.71□□□□□ -1.82
VPS50-209ENST00000467326 ACTR3BQ9P1U1 418 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 EXTL2Q9UBQ6 330 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 LIMA1Q9UHB6 759 aaKnown RBP3.71□□□□□ -1.82
VPS50-209ENST00000467326 CORO1CQ9ULV4 474 aaPredicted RBP3.71□□□□□ -1.82
VPS50-209ENST00000467326 ERVK-11Q9UQG0 969 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 NAALADL1Q9UQQ1 740 aa3.71□□□□□ -1.82
VPS50-209ENST00000467326 AAR2Q9Y312 384 aaKnown RBP3.71□□□□□ -1.82
VPS50-209ENST00000467326 A0A0G2JPF8 293 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 A0A1W2PQM1 296 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms