RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 PROKR1Q8TCW9 393 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 GIPC2Q8TF65 315 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 RORBQ92753 470 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 PABPC5Q96DU9 382 aaKnown RBP7.21□□□□□ -1.25
USP48-206ENST00000464577 REXO5Q96IC2 774 aaKnown RBP7.21□□□□□ -1.25
USP48-206ENST00000464577 ZNF300Q96RE9 604 aaPredicted RBP7.21□□□□□ -1.25
USP48-206ENST00000464577 OSMRQ99650 979 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 TRIT1Q9H3H1 467 aaKnown RBP7.21□□□□□ -1.25
USP48-206ENST00000464577 MAGIXQ9H6Y5 334 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 SMURF2Q9HAU4 748 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 TXNRD2Q9NNW7 524 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 SACM1LQ9NTJ5 587 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 PAK1IP1Q9NWT1 392 aaPredicted RBP7.21□□□□□ -1.25
USP48-206ENST00000464577 RBPJLQ9UBG7 517 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 INTS6Q9UL03 887 aaKnown RBP7.21□□□□□ -1.25
USP48-206ENST00000464577 RNF112Q9ULX5 631 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 AP3M1Q9Y2T2 418 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 TMEM98Q9Y2Y6 226 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 MAGED1Q9Y5V3 778 aaPredicted RBP7.21□□□□□ -1.25
USP48-206ENST00000464577 HSPE1-MOB4S4R3N1 261 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 ANKRD36A6QL64 1941 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 NUP205Q92621 2012 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 A0A1B0GTL3 188 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 MYBPHLA2RUH7 354 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 LCHNA4D1U4 455 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 TTC34A8MYJ7 566 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 FAM47E-STBD1D6RA91 191 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 AREL1O15033 823 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 CD3EAPO15446 510 aaKnown RBP7.21□□□□□ -1.26
USP48-206ENST00000464577 NUAK1O60285 661 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 PAGE1O75459 146 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 ECI2O75521 394 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 MYO1DO94832 1006 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 SCELO95171 688 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 GLP2RO95838 553 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 CST1P01037 141 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 MMP2P08253 660 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 ATXN1LP0C7T5 689 aaKnown RBP7.21□□□□□ -1.26
USP48-206ENST00000464577 BMP1P13497 986 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 JUNDP17535 347 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 AGXTP21549 392 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 SERPINB1P30740 379 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 EIF2DP41214 584 aaKnown RBP7.21□□□□□ -1.26
USP48-206ENST00000464577 CD86P42081 329 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 PPP5CP53041 499 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 CXCR4P61073 352 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 MVKQ03426 396 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 EMX1Q04741 257 aaPredicted RBP7.21□□□□□ -1.26
USP48-206ENST00000464577 PIGFQ07326 219 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 SELPLGQ14242 412 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 TYSND1Q2T9J0 566 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 SIRPB2Q5JXA9 342 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 C6orf136Q5SQH8 315 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 SYT6Q5T7P8 510 aaPredicted RBP7.21□□□□□ -1.26
USP48-206ENST00000464577 IER5LQ5T953 404 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 THOC7Q6I9Y2 204 aaKnown RBP7.21□□□□□ -1.26
USP48-206ENST00000464577 TUBA3EQ6PEY2 450 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 SLC22A16Q86VW1 577 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 P2RY8Q86VZ1 359 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 RALGPS2Q86X27 583 aaPredicted RBP7.21□□□□□ -1.26
USP48-206ENST00000464577 SETD9Q8NE22 299 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 OR56A4Q8NGH8 313 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 OR2T11Q8NH01 316 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 NDNFQ8TB73 568 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 CHAC2Q8WUX2 184 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 SLC47A1Q96FL8 570 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 SENP8Q96LD8 212 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 ZNF583Q96ND8 569 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 CAMKK2Q96RR4 588 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 SIK2Q9H0K1 926 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 CARS2Q9HA77 564 aaKnown RBP7.21□□□□□ -1.26
USP48-206ENST00000464577 SPC25Q9HBM1 224 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 MOV10Q9HCE1 1003 aaKnown RBP7.21□□□□□ -1.26
USP48-206ENST00000464577 SEMA4BQ9NPR2 832 aaPredicted RBP7.21□□□□□ -1.26
USP48-206ENST00000464577 PCTPQ9UKL6 214 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 PIN4Q9Y237 131 aaKnown RBP7.21□□□□□ -1.26
USP48-206ENST00000464577 ATP11BQ9Y2G3 1177 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 CRYL1Q9Y2S2 319 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 IFT52Q9Y366 437 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 NEUROG3Q9Y4Z2 214 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 TIMM22Q9Y584 194 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 PMF1-BGLAPU3KQ54 211 aa7.21□□□□□ -1.26
USP48-206ENST00000464577 SMIM35A0A1B0GVV1 85 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 LOC285095A0A1B0GVY8 99 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 OR51F1A6NGY5 319 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 SAGE2PA6NJ88 616 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 NFKBIEO00221 500 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 TOR1BO14657 336 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 BCKDKO14874 412 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 AXIN1O15169 862 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 RPP40O75818 363 aaKnown RBP7.2□□□□□ -1.26
USP48-206ENST00000464577 GOT2P00505 430 aaKnown RBP7.2□□□□□ -1.26
USP48-206ENST00000464577 PCNAP12004 261 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 IL1RNP18510 177 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 MSH3P20585 1137 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 NR4A1P22736 598 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 NFKBIAP25963 317 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 CCR1P32246 355 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 SOX11P35716 441 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 STC1P52823 247 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms