RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 ZNF639Q9UID6 485 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 BLOC1S6Q9UL45 172 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 GABRQQ9UN88 632 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 BTRCQ9Y297 605 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 MED16Q9Y2X0 877 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 RNF11Q9Y3C5 154 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 OARD1Q9Y530 152 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 ANGPTL3Q9Y5C1 460 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 SPO11Q9Y5K1 396 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 PDE4DIPQ5VU43 2346 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 TCRBV5S2A0A599 114 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 KLHL33A6NCF5 533 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 PABPN1LA6NDY0 278 aaKnown RBP8.73□□□□□ -1.01
HDAC3-202ENST00000459727 C16orf96A6NNT2 1141 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 ARVCFO00192 962 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 CBX4O00257 560 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 CDC7O00311 574 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 ENPP3O14638 875 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 CLOCKO15516 846 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 COCHO43405 550 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 STC2O76061 302 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 MT-CO1P00395 513 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 C1RP00736 705 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 PRLP01236 227 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 F11P03951 625 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 IL6P05231 212 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 GALTP07902 379 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 ANXA6P08133 673 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 EBLN1P0CF75 366 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 RAP2AP10114 183 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 CD1EP15812 388 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 PFKLP17858 780 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 ATF6P18850 670 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 TSPAN8P19075 237 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 HDCP19113 662 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 VARSP26640 1264 aaKnown RBP8.73□□□□□ -1.01
HDAC3-202ENST00000459727 CTGFP29279 349 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 RGS19P49795 217 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 KCNQ1P51787 676 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 CREMQ03060 361 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 CHRNB3Q05901 458 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 TWF1Q12792 350 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 TOP3AQ13472 1001 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-202ENST00000459727 BIRC2Q13490 618 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 MYBPC3Q14896 1274 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 NR6A1Q15406 480 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 RFX4Q33E94 735 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 CTSL3PQ5NE16 218 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 CCNYL2Q5T2Q4 361 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 RNF219Q5W0B1 726 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-202ENST00000459727 GRAMD4Q6IC98 578 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 DHRS4L2Q6PKH6 230 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 TAS2R42Q7RTR8 314 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 SNX20Q7Z614 316 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 AMIGO2Q86SJ2 522 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 SPPL2CQ8IUH8 684 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 DENND1CQ8IV53 801 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 FAM126BQ8IXS8 530 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 CBARPQ8N350 705 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-202ENST00000459727 SVOPLQ8N434 492 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 TTC9BQ8N6N2 239 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 METTL25Q8N6Q8 603 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 ZNF557Q8N988 423 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-202ENST00000459727 MDGA1Q8NFP4 955 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 METTL6Q8TCB7 284 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 ACDQ96AP0 544 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 VPS33AQ96AX1 596 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 NSUN5Q96P11 429 aaKnown RBP8.73□□□□□ -1.01
HDAC3-202ENST00000459727 HTATIP2Q9BUP3 242 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 GPR62Q9BZJ7 368 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 MAGIXQ9H6Y5 334 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 GORASP2Q9H8Y8 452 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 OLAHQ9NV23 265 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 IL17CQ9P0M4 197 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 FKBPLQ9UIM3 349 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 LSM7Q9UK45 103 aaKnown RBP8.73□□□□□ -1.01
HDAC3-202ENST00000459727 PHF24Q9UPV7 400 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 MAPRE3Q9UPY8 281 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 SLC27A5Q9Y2P5 690 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 GMEB1Q9Y692 573 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 CEPT1Q9Y6K0 416 aa8.73□□□□□ -1.01
HDAC3-202ENST00000459727 NUP205Q92621 2012 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 A0A1W2PQ45 241 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-202ENST00000459727 A0A1W2PQY0 241 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 SAC3D1A6NKF1 404 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 TMEM88BA6NKF7 163 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 H0Y626 953 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 SOCS2O14508 198 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 LSM1O15116 133 aaKnown RBP8.72□□□□□ -1.01
HDAC3-202ENST00000459727 KPNA5O15131 536 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 FFAR2O15552 330 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 FZD6O60353 706 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 NIPSNAP2O75323 286 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 SCELO95171 688 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 PGLSO95336 258 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 KRT6AP02538 564 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 KRT6BP04259 564 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 PIRTP0C851 137 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 NFKBIAP25963 317 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 ARL1P40616 181 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms