RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 PRSS56P0CW18 603 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 TTPAP49638 278 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 HHEXQ03014 270 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 CKAP4Q07065 602 aaKnown RBP14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 TUBB2AQ13885 445 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 SPIDRQ14159 915 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 IZUMO3Q5VZ72 239 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 KIAA0930Q6ICG6 404 aaPredicted RBP14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 DET1Q7L5Y6 550 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 SPRED1Q7Z699 444 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 TMEM135Q86UB9 458 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 CCNJLQ8IV13 435 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 BEND7Q8N7W2 519 aaPredicted RBP14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 BBOF1Q8ND07 529 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 MFSD3Q96ES6 412 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 SIGLEC10Q96LC7 697 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 TUBB2BQ9BVA1 445 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 LRRN3Q9H3W5 708 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 UCK1Q9HA47 277 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 PRDM8Q9NQV8 689 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 CATSPERZQ9NTU4 200 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 ACSL5Q9ULC5 683 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 NCOR2Q9Y618 2525 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 BPTFQ12830 3046 aa14.77□□□□□ -0.05
CSNK1E-210ENST00000442216 PDZK1P1A8MUH7 402 aa14.76□□□□□ -0.05
CSNK1E-210ENST00000442216 CD3EAPO15446 510 aaKnown RBP14.76□□□□□ -0.05
CSNK1E-210ENST00000442216 USP1O94782 785 aa14.76□□□□□ -0.05
CSNK1E-210ENST00000442216 SPINK2P20155 84 aa14.76□□□□□ -0.05
CSNK1E-210ENST00000442216 HALP42357 657 aa14.76□□□□□ -0.05
CSNK1E-210ENST00000442216 CCL7P80098 99 aa14.76□□□□□ -0.05
CSNK1E-210ENST00000442216 GPLD1P80108 840 aa14.76□□□□□ -0.05
CSNK1E-210ENST00000442216 SQSTM1Q13501 440 aa14.76□□□□□ -0.05
CSNK1E-210ENST00000442216 HIBCHQ6NVY1 386 aaPredicted RBP14.76□□□□□ -0.05
CSNK1E-210ENST00000442216 CASC4Q6P4E1 433 aa14.76□□□□□ -0.05
CSNK1E-210ENST00000442216 RBM44Q6ZP01 1051 aaKnown RBP14.76□□□□□ -0.05
CSNK1E-210ENST00000442216 RBM12BQ8IXT5 1001 aaKnown RBP14.76□□□□□ -0.05
CSNK1E-210ENST00000442216 HM13Q8TCT9 377 aa14.76□□□□□ -0.05
CSNK1E-210ENST00000442216 SNF8Q96H20 258 aa14.76□□□□□ -0.05
CSNK1E-210ENST00000442216 GFM1Q96RP9 751 aaKnown RBP14.76□□□□□ -0.05
CSNK1E-210ENST00000442216 CCM2Q9BSQ5 444 aa14.76□□□□□ -0.05
CSNK1E-210ENST00000442216 NAT9Q9BTE0 207 aa14.76□□□□□ -0.05
CSNK1E-210ENST00000442216 POT1Q9NUX5 634 aa14.76□□□□□ -0.05
CSNK1E-210ENST00000442216 CPNE7Q9UBL6 633 aa14.76□□□□□ -0.05
CSNK1E-210ENST00000442216 A0A1W2PQM1 296 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 EFCAB8A8MWE9 144 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 TMX2-CTNND1H3BSU7 103 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 PFDN6O15212 129 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 B4GAT1O43505 415 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 SEC31AO94979 1220 aaKnown RBP14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 VAPBO95292 243 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 FTH1P02794 183 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 RPLP0P05388 317 aaKnown RBP14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 OR56A5P0C7T3 313 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 BRAFP15056 766 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 ARNTP27540 789 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 RPL10P27635 214 aaKnown RBP14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 EPHA4P54764 986 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 UBE2IP63279 158 aaKnown RBP14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 TARDBPQ13148 414 aaKnown RBP eCLIP14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 RPA4Q13156 261 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 CAMK2BQ13554 666 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 NFE2L1Q14494 772 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 WHAMMP3Q1A5X7 153 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 ANKRD20A4Q4UJ75 823 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 DNAJC21Q5F1R6 531 aaKnown RBP14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 MRNIPQ6NTE8 343 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 GPR150Q8NGU9 434 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 CCDC97Q96F63 343 aaPredicted RBP14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 TCF12Q99081 682 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 DPYSL5Q9BPU6 564 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 TRIM51Q9BSJ1 452 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 EPB41L1Q9H4G0 881 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 SCHIP1Q9P0W5 487 aaPredicted RBP14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 RPS6KL1Q9Y6S9 549 aa14.75□□□□□ -0.05
CSNK1E-210ENST00000442216 TRBV23OR9-2A0A075B6M9 112 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 LILRA5A6NI73 299 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 D6RAR5 112 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 URI1O94763 535 aaPredicted RBP14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 TTC4O95801 387 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 VIPP01282 170 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 POLBP06746 335 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 OGNP20774 298 aaKnown RBP14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 RPS3P23396 243 aaKnown RBP eCLIP14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 PBLDP30039 288 aaPredicted RBP14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 SLC19A1P41440 591 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 ARCN1P48444 511 aaKnown RBP14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 ITGA8P53708 1063 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 DRG2P55039 364 aaKnown RBP14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 PLOD1Q02809 727 aaPredicted RBP14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 CBLBQ13191 982 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 SEMA3AQ14563 771 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 CLCA4Q14CN2 919 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 ISXQ2M1V0 245 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 ZNF658BQ4V348 819 aaPredicted RBP14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 RNF187Q5TA31 235 aaPredicted RBP14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 ZNF449Q6P9G9 518 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 FAM83HQ6ZRV2 1179 aaPredicted RBP14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 SDCCAG8Q86SQ7 713 aaPredicted RBP14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 LRRC6Q86X45 466 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms