RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 HOXB6P17509 224 aaKnown RBP3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 GM2AP17900 193 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 DGKAP23743 735 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 CALRP27797 417 aaKnown RBP3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 AHRP35869 848 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 MATR3P43243 847 aaKnown RBP eCLIP3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 RAD52P43351 418 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 ARCN1P48444 511 aaKnown RBP3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 HOXA1P49639 335 aaPredicted RBP3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 HSD17B4P51659 736 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 SUOXP51687 545 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 ZNF132P52740 706 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 ISL1P61371 349 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 PITX1P78337 314 aaPredicted RBP3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 PPP2R2BQ00005 443 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 SPOCK1Q08629 439 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 UBE2V1Q13404 147 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 DLG2Q15700 870 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 IGSF11Q5DX21 431 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 PDSS1Q5T2R2 415 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 OR7E24Q6IFN5 339 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 Q75L30 129 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 ENOSF1Q7L5Y1 443 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 KBTBD6Q86V97 674 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 RFLNBQ8N5W9 214 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 SLC44A1Q8WWI5 657 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 CD101Q93033 1021 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 PCYT2Q99447 389 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 GFI1Q99684 422 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 PDE7BQ9NP56 450 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 PLSCR4Q9NRQ2 329 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 NKIRAS2Q9NYR9 191 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 WSB2Q9NYS7 404 aaPredicted RBP3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 CPSF2Q9P2I0 782 aaKnown RBP3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 LARSQ9P2J5 1176 aaKnown RBP3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 HACL1Q9UJ83 578 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 ZNF580Q9UK33 172 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 RALYQ9UKM9 306 aaKnown RBP3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 PTRH2Q9Y3E5 179 aaKnown RBP3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 OR2W1Q9Y3N9 320 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 ZNF541Q9H0D2 1346 aa3.65□□□□□ -1.83
LSM1P1-201ENST00000438629 A6NL46 340 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 EIF3DO15371 548 aaKnown RBP eCLIP3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 SYNGR3O43761 229 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 PRAMEF11O60813 436 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 BMP10O95393 424 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 LDLRP01130 860 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 F7P08709 466 aaPredicted RBP3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 ITGA2P17301 1181 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 ITGB6P18564 788 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 TRIM21P19474 475 aaKnown RBP3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 CD81P60033 236 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 ERVFC1-1P60608 527 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 SNRPEP62304 92 aaKnown RBP3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 HNRNPA0Q13151 305 aaKnown RBP3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 NR1D2Q14995 579 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 FAM98BQ52LJ0 330 aaKnown RBP3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 GARNL3Q5VVW2 1013 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 RUSC1-AS1Q66K80 236 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 NAA16Q6N069 864 aaPredicted RBP3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 FAM171BQ6P995 826 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 TMCO3Q6UWJ1 677 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 KRT74Q7RTS7 529 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 GALNT13Q8IUC8 556 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 DCP1BQ8IZD4 617 aaKnown RBP3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 GUF1Q8N442 669 aaKnown RBP3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 GBGT1Q8N5D6 347 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 MINDY1Q8N5J2 469 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 POMGNT2Q8NAT1 580 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 AVL9Q8NBF6 648 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 BBS10Q8TAM1 723 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 PTPMT1Q8WUK0 201 aaPredicted RBP3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 NEK1Q96PY6 1258 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 CTAGE1Q96RT6 745 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 PAFAH2Q99487 392 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 HGH1Q9BTY7 390 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 MOV10L1Q9BXT6 1211 aaKnown RBP3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 ABCF3Q9NUQ8 709 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 TAS2R14Q9NYV8 317 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 STK26Q9P289 416 aa3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 NOL7Q9UMY1 257 aaKnown RBP3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 ASTN2O75129 1339 aaPredicted RBP3.64□□□□□ -1.83
LSM1P1-201ENST00000438629 GPR75-ASB3A0A0A6YYF3 556 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 OR2M5A3KFT3 312 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 PRSS44E7EML9 344 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 C16orf97H3BN30 126 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 ADAMDEC1O15204 470 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 BUB3O43684 328 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 TSPAN1O60635 241 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 ERAL1O75616 437 aaKnown RBP3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 PDE9AO76083 593 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 PGM3O95394 542 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 TUBBP07437 444 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 CETPP11597 493 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 CSF2RAP15509 400 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 AMD1P17707 334 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 NMBRP28336 390 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 DEKP35659 375 aaKnown RBP3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 FMO5P49326 533 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms