RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 CAVIN3Q969G5 261 aa15.11■□□□□ 0.01
CNOT9-205ENST00000433439 SCARF2Q96GP6 870 aaPredicted RBP15.11■□□□□ 0.01
CNOT9-205ENST00000433439 ZNF514Q96K75 400 aaPredicted RBP15.11■□□□□ 0.01
CNOT9-205ENST00000433439 CPNE1Q99829 537 aa15.11■□□□□ 0.01
CNOT9-205ENST00000433439 LRRC61Q9BV99 259 aa15.11■□□□□ 0.01
CNOT9-205ENST00000433439 P2RY12Q9H244 342 aa15.11■□□□□ 0.01
CNOT9-205ENST00000433439 ACSS3Q9H6R3 686 aa15.11■□□□□ 0.01
CNOT9-205ENST00000433439 RXFP3Q9NSD7 469 aa15.11■□□□□ 0.01
CNOT9-205ENST00000433439 KLC4Q9NSK0 619 aa15.11■□□□□ 0.01
CNOT9-205ENST00000433439 UCKL1Q9NWZ5 548 aa15.11■□□□□ 0.01
CNOT9-205ENST00000433439 SLC23A2Q9UGH3 650 aa15.11■□□□□ 0.01
CNOT9-205ENST00000433439 PCDHB1Q9Y5F3 818 aa15.11■□□□□ 0.01
CNOT9-205ENST00000433439 LRP4O75096 1905 aa15.11■□□□□ 0.01
CNOT9-205ENST00000433439 GPR179Q6PRD1 2367 aa15.11■□□□□ 0.01
CNOT9-205ENST00000433439 PCDH15Q96QU1 1955 aa15.11■□□□□ 0.01
CNOT9-205ENST00000433439 KNL1Q8NG31 2342 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 EXOC1LA0A1B0GW35 172 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 E5RI56 91 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 F8W8V4 182 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 FFAR2O15552 330 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 SNX2O60749 519 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 PIAS2O75928 621 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 AP2A2O94973 939 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 C1QAP02745 245 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 FTH1P02794 183 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 ABHD2P08910 425 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 CHRM3P20309 590 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 RPS3P23396 243 aaKnown RBP eCLIP15.1■□□□□ 0.01
CNOT9-205ENST00000433439 HSD17B3P37058 310 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 GP5P40197 560 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 ACTR1BP42025 376 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 CCT8P50990 548 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 ACTR1AP61163 376 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 BOP1Q14137 746 aaKnown RBP15.1■□□□□ 0.01
CNOT9-205ENST00000433439 SHBQ15464 509 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 KLHL38Q2WGJ6 581 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 UAP1L1Q3KQV9 507 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 BCL7AQ4VC05 210 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 RBM20Q5T481 1227 aaKnown RBP15.1■□□□□ 0.01
CNOT9-205ENST00000433439 ZNF449Q6P9G9 518 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 PRR23CQ6ZRP0 262 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 CYS1Q717R9 158 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 AMZ2Q86W34 360 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 SLC26A11Q86WA9 606 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 LRRC6Q86X45 466 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 ZNF548Q8NEK5 533 aaPredicted RBP15.1■□□□□ 0.01
CNOT9-205ENST00000433439 SCG3Q8WXD2 468 aaKnown RBP15.1■□□□□ 0.01
CNOT9-205ENST00000433439 ELMO1Q92556 727 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 CCM2Q9BSQ5 444 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 TSSK1BQ9BXA7 367 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 GSDMCQ9BYG8 508 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 EPB41L4BQ9H329 900 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 GPR34Q9UPC5 381 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 IKBKGQ9Y6K9 419 aa15.1■□□□□ 0.01
CNOT9-205ENST00000433439 SMIM23A6NLE4 172 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 QSOX1O00391 747 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 AQP9O43315 295 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 DFNA5O60443 496 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 LRP3O75074 770 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 ESR1P03372 595 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 INHBAP08476 426 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 VCLP18206 1134 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 DGKAP23743 735 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 EPHA8P29322 1005 aaPredicted RBP15.09■□□□□ 0.01
CNOT9-205ENST00000433439 MSH2P43246 934 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 RXRGP48443 463 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 NAB1Q13506 487 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 NFE2L1Q14494 772 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 ELOCQ15369 112 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 SEPT7Q16181 437 aaKnown RBP15.09■□□□□ 0.01
CNOT9-205ENST00000433439 DEFB133Q30KQ1 61 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 ZNF549Q6P9A3 640 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 ZC3HC1Q86WB0 502 aaKnown RBP15.09■□□□□ 0.01
CNOT9-205ENST00000433439 SPNS2Q8IVW8 549 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 CFAP206Q8IYR0 622 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 VPS39Q96JC1 886 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 ELMO2Q96JJ3 720 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 BIRC8Q96P09 236 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 PANX3Q96QZ0 392 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 CCDC77Q9BR77 488 aa15.09■□□□□ 0.01
CNOT9-205ENST00000433439 TRNAU1APQ9NX07 287 aaKnown RBP15.09■□□□□ 0.01
CNOT9-205ENST00000433439 TSR3Q9UJK0 312 aaKnown RBP15.09■□□□□ 0.01
CNOT9-205ENST00000433439 CACNA1EQ15878 2313 aa15.08■□□□□ 0
CNOT9-205ENST00000433439 FAM95CA0A1B0GW59 222 aa15.08■□□□□ 0
CNOT9-205ENST00000433439 CCDC151A5D8V7 595 aa15.08■□□□□ 0
CNOT9-205ENST00000433439 MGAT4DA6NG13 374 aa15.08■□□□□ 0
CNOT9-205ENST00000433439 H3BMM5 538 aa15.08■□□□□ 0
CNOT9-205ENST00000433439 KRT37O76014 449 aa15.08■□□□□ 0
CNOT9-205ENST00000433439 SHBGP04278 402 aa15.08■□□□□ 0
CNOT9-205ENST00000433439 ANXA6P08133 673 aa15.08■□□□□ 0
CNOT9-205ENST00000433439 ARHGAP8P85298 464 aa15.08■□□□□ 0
CNOT9-205ENST00000433439 SYTL3Q4VX76 610 aa15.08■□□□□ 0
CNOT9-205ENST00000433439 GRTP1Q5TC63 336 aa15.08■□□□□ 0
CNOT9-205ENST00000433439 HECTD2Q5U5R9 776 aa15.08■□□□□ 0
CNOT9-205ENST00000433439 C11orf96Q7Z7L8 435 aa15.08■□□□□ 0
CNOT9-205ENST00000433439 GKN2Q86XP6 184 aa15.08■□□□□ 0
CNOT9-205ENST00000433439 FSTL5Q8N475 847 aaPredicted RBP15.08■□□□□ 0
CNOT9-205ENST00000433439 LILRA3Q8N6C8 439 aaPredicted RBP15.08■□□□□ 0
CNOT9-205ENST00000433439 FAM46DQ8NEK8 389 aa15.08■□□□□ 0
CNOT9-205ENST00000433439 PAFAH2Q99487 392 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms