RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 GDF3Q9NR23 364 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 ENAMQ9NRM1 1142 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 MCUBQ9NWR8 336 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 CD84Q9UIB8 345 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 NCOA3Q9Y6Q9 1424 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 CCT8L1PA6NM43 557 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 TMX2-CTNND1H3BSU7 103 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 GPR25O00155 361 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 SCDO00767 359 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 DDX3YO15523 660 aaKnown RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 SSNA1O43805 119 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 SERPINE1P05121 402 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 MSX1P28360 303 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 SLC6A9P48067 706 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 PPP2R2BQ00005 443 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 IL18R1Q13478 541 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 LRP8Q14114 963 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 NOXRED1Q6NXP6 359 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 FRRS1Q6ZNA5 592 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 FAM183BPQ6ZVS7 135 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 LILRB2Q8N423 598 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 ANKRD52Q8NB46 1076 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 FBXO30Q8TB52 745 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 ACOT12Q8WYK0 555 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 COQ8BQ96D53 544 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 NECTIN4Q96NY8 510 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 FCRL4Q96PJ5 515 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 C17orf62Q9BQA9 187 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 CRISPLD1Q9H336 500 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 FBXO6Q9NRD1 293 aaPredicted RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 KCNK4Q9NYG8 393 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 PADI3Q9ULW8 664 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 PCDHGB6Q9Y5F9 930 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 PCDHGB1Q9Y5G3 927 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 ZFP37Q9Y6Q3 630 aaPredicted RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 DIP2AQ14689 1571 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 DNALI1O14645 258 aaPredicted RBP5.67□□□□□ -1.5
HERC4-206ENST00000427635 ZNF185O15231 689 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 CHST10O43529 356 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 NUAK1O60285 661 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 CRTAPO75718 401 aaPredicted RBP5.67□□□□□ -1.5
HERC4-206ENST00000427635 NUDT17P0C025 328 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 IL12RB1P42701 662 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 BRCC3P46736 316 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 ATP6V0D1P61421 351 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 RPL38P63173 70 aaKnown RBP5.67□□□□□ -1.5
HERC4-206ENST00000427635 CYP4F8P98187 520 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 MC1RQ01726 317 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 CHAF1BQ13112 559 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 PKP1Q13835 747 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 PUM1Q14671 1186 aaKnown RBP eCLIP5.67□□□□□ -1.5
HERC4-206ENST00000427635 PTPRNQ16849 979 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 HKDC1Q2TB90 917 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 CPTPQ5TA50 214 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 KIAA1614Q5VZ46 1190 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 QSOX2Q6ZRP7 698 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 LRRC70Q7Z2Q7 622 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 C6orf120Q7Z4R8 191 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 METTL16Q86W50 562 aaKnown RBP5.67□□□□□ -1.5
HERC4-206ENST00000427635 ZDHHC13Q8IUH4 622 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 SPERTQ8NA61 448 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 UBASH3BQ8TF42 649 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 AP3S1Q92572 193 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 MFSD3Q96ES6 412 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 FUBP3Q96I24 572 aaKnown RBP eCLIP5.67□□□□□ -1.5
HERC4-206ENST00000427635 FAM129BQ96TA1 746 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 DCUN1D5Q9BTE7 237 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 WDR18Q9BV38 432 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 C8orf33Q9H7E9 229 aaPredicted RBP5.67□□□□□ -1.5
HERC4-206ENST00000427635 EIF2B3Q9NR50 452 aaKnown RBP5.67□□□□□ -1.5
HERC4-206ENST00000427635 PLK2Q9NYY3 685 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 SLC24A2Q9UI40 661 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 MED16Q9Y2X0 877 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 NPIPA5E9PKD4 350 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 AGPSO00116 658 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 MRASO14807 208 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 TBX1O43435 398 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 CPNE6O95741 557 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 HEXAP06865 529 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 ATF4P18848 351 aaPredicted RBP5.67□□□□□ -1.5
HERC4-206ENST00000427635 VLDLRP98155 873 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 CREB5Q02930 508 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 PUDPQ08623 228 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 ST3GAL4Q11206 333 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 DSG2Q14126 1118 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 DGUOKQ16854 277 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 STOX1Q6ZVD7 989 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 KYQ8NBH2 561 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 PDPRQ8NCN5 879 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 ZMIZ2Q8NF64 920 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 OR4C15Q8NGM1 316 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 ZNF606Q8WXB4 792 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 TMEM68Q96MH6 324 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 MNTQ99583 582 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 ACO2Q99798 780 aaKnown RBP5.67□□□□□ -1.5
HERC4-206ENST00000427635 C9orf16Q9BUW7 83 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 DUSP16Q9BY84 665 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 GRIP2Q9C0E4 1043 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 SP140LQ9H930 580 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 CRNNQ9UBG3 495 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms