RNA–Protein interactions for RNA: ENST00000424867.1

PBRM1-212, Transcript of polybromo 1, humanhuman

TSL 5

Gene PBRM1, Length 457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-212ENST00000424867 COLGALT1Q8NBJ5 622 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 ZFP28Q8NHY6 868 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 UBA3Q8TBC4 463 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 ADAMTS16Q8TE57 1224 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 STYXQ8WUJ0 223 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 PDCD6IPQ8WUM4 868 aaKnown RBP6.32□□□□□ -1.4
PBRM1-212ENST00000424867 GFM2Q969S9 779 aaKnown RBP6.32□□□□□ -1.4
PBRM1-212ENST00000424867 NT5C3BQ969T7 300 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 CCDC124Q96CT7 223 aaKnown RBP6.32□□□□□ -1.4
PBRM1-212ENST00000424867 HPDLQ96IR7 371 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 CATSPER2Q96P56 530 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 LENG8Q96PV6 779 aaPredicted RBP6.32□□□□□ -1.4
PBRM1-212ENST00000424867 GCNAQ96QF7 691 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 RAD9AQ99638 391 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 DNAI2Q9GZS0 605 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 ZCWPW1Q9H0M4 648 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 TRPV6Q9H1D0 765 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 PRDM12Q9H4Q4 367 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 LRRC40Q9H9A6 602 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 CYP4F11Q9HBI6 524 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 ZBTB26Q9HCK0 441 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 PREBQ9HCU5 417 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 PDGFCQ9NRA1 345 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 MRGBPQ9NV56 204 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 TBCCD1Q9NVR7 557 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 OXSMQ9NWU1 459 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 CLIC5Q9NZA1 410 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 PTGFRNQ9P2B2 879 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 IPO11Q9UI26 975 aaKnown RBP6.32□□□□□ -1.4
PBRM1-212ENST00000424867 RNF11Q9Y3C5 154 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 SQORQ9Y6N5 450 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 GBF1Q92538 1859 aa6.32□□□□□ -1.4
PBRM1-212ENST00000424867 LAMA2P24043 3122 aaKnown RBP6.32□□□□□ -1.4
PBRM1-212ENST00000424867 COL1A2P08123 1366 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 SHROOM3Q8TF72 1996 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 ARHGAP10A1A4S6 786 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 ERI2A8K979 691 aaKnown RBP6.31□□□□□ -1.4
PBRM1-212ENST00000424867 ACOT7O00154 380 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 MASP2O00187 686 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 RNF103O00237 685 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 SCAMP3O14828 347 aaKnown RBP6.31□□□□□ -1.4
PBRM1-212ENST00000424867 TIMM44O43615 452 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 CACNG3O60359 315 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 ZMPSTE24O75844 475 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 ARIH2O95376 493 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 PGM3O95394 542 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 AP2A1O95782 977 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 POLBP06746 335 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 KRT19P08727 400 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 FAM58BPP0C7Q3 252 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 SRGAP2CP0DJJ0 459 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 SRGAP2BP0DMP2 458 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 CYP2C9P11712 490 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 NCF2P19878 526 aaPredicted RBP6.31□□□□□ -1.4
PBRM1-212ENST00000424867 ME2P23368 584 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 PSMB4P28070 264 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 TYK2P29597 1187 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 SERPINB5P36952 375 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 ACADSBP45954 432 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 ERFP50548 548 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 NUDT2P50583 147 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 CDK9P50750 372 aaKnown RBP6.31□□□□□ -1.4
PBRM1-212ENST00000424867 KCNQ1P51787 676 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 BCAT1P54687 386 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 KRTAP10-11P60412 298 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 TUBA4AP68366 448 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 MRPS22P82650 360 aaKnown RBP6.31□□□□□ -1.4
PBRM1-212ENST00000424867 RBP5P82980 135 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 MS4A2Q01362 244 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 ARHGAP1Q07960 439 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 BST2Q10589 180 aaKnown RBP6.31□□□□□ -1.4
PBRM1-212ENST00000424867 TRAP1Q12931 704 aaKnown RBP6.31□□□□□ -1.4
PBRM1-212ENST00000424867 PRKAA1Q13131 559 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 CYLC2Q14093 348 aaPredicted RBP6.31□□□□□ -1.4
PBRM1-212ENST00000424867 FLOT2Q14254 428 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 PTK2BQ14289 1009 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 TMEM132DQ14C87 1099 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 ZBTB6Q15916 424 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 LRRC36Q1X8D7 754 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 KIZQ2M2Z5 673 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 SOWAHAQ2M3V2 549 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 CELF3Q5SZQ8 465 aaKnown RBP6.31□□□□□ -1.4
PBRM1-212ENST00000424867 SEL1L3Q68CR1 1132 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 HACD2Q6Y1H2 254 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 LARP4Q71RC2 724 aaKnown RBP eCLIP6.31□□□□□ -1.4
PBRM1-212ENST00000424867 CMC1Q7Z7K0 106 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 ERI1Q8IV48 349 aaKnown RBP6.31□□□□□ -1.4
PBRM1-212ENST00000424867 CCDC117Q8IWD4 279 aaPredicted RBP6.31□□□□□ -1.4
PBRM1-212ENST00000424867 CNTN4Q8IWV2 1026 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 ZNF567Q8N184 647 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 CRYBG2Q8N1P7 616 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 LRRC71Q8N4P6 559 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 CCDC185Q8N715 623 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 LRRC52Q8N7C0 313 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 KDM1BQ8NB78 822 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 HM13Q8TCT9 377 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 RNF139Q8WU17 664 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 ASB9Q96DX5 294 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 P2RY11Q96G91 374 aa6.31□□□□□ -1.4
PBRM1-212ENST00000424867 KLHL32Q96NJ5 620 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms