RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 PCDHB3Q9Y5E6 796 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 MRPS18BQ9Y676 258 aaKnown RBP9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 APCP25054 2843 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 PDZD2O15018 2839 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 NF1P21359 2839 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 SYCE3A1L190 88 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 OR52A4PA6NMU1 304 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 GOLGA6L19H0YKK7 550 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 APOL1O14791 398 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 AURKAO14965 403 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 PPP1R12AO14974 1030 aaPredicted RBP9□□□□□ -0.97
NIF3L1-203ENST00000409129 KIF1CO43896 1103 aaKnown RBP9□□□□□ -0.97
NIF3L1-203ENST00000409129 MTX2O75431 263 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 KATNA1O75449 491 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 SPAG6O75602 509 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 RASSF9O75901 435 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 KIAA0754O94854 1291 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 NDUFA10O95299 355 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 NDST3O95803 873 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 MT-CYBP00156 380 aaPredicted RBP9□□□□□ -0.97
NIF3L1-203ENST00000409129 TMEM253P0C7T8 217 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 FGF5P12034 268 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 VCLP18206 1134 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 ELAVL4P26378 380 aaKnown RBP9□□□□□ -0.97
NIF3L1-203ENST00000409129 RPL10P27635 214 aaKnown RBP9□□□□□ -0.97
NIF3L1-203ENST00000409129 DLSTP36957 453 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 ARHGAP25P42331 645 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 CD97P48960 835 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 TMEM115Q12893 351 aaPredicted RBP9□□□□□ -0.97
NIF3L1-203ENST00000409129 GPR18Q14330 331 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 ASTE1Q2TB18 679 aaPredicted RBP9□□□□□ -0.97
NIF3L1-203ENST00000409129 KHDC1Q4VXA5 237 aaKnown RBP9□□□□□ -0.97
NIF3L1-203ENST00000409129 LACTB2Q53H82 288 aaPredicted RBP9□□□□□ -0.97
NIF3L1-203ENST00000409129 TEX44Q53QW1 395 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 CACHD1Q5VU97 1274 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 BLOC1S3Q6QNY0 202 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 NPNTQ6UXI9 565 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 B4GALNT4Q76KP1 1039 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 PRSS42Q7Z5A4 293 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 C11orf96Q7Z7L8 435 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 RASGRP3Q8IV61 690 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 GALNT6Q8NCL4 622 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 SPATA22Q8NHS9 363 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 SLC35G2Q8TBE7 412 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 SSC4DQ8WTU2 575 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 KLHL6Q8WZ60 621 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 CXorf40BQ96DE9 158 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 RNF31Q96EP0 1072 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 STAMBPL1Q96FJ0 436 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 ZDHHC12Q96GR4 267 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 ELMO2Q96JJ3 720 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 OLFM3Q96PB7 478 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 VPS35Q96QK1 796 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 RAB33BQ9H082 229 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 GLOD4Q9HC38 313 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 BPIFA1Q9NP55 256 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 IFNKQ9P0W0 207 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 TRIM10Q9UDY6 481 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 EPHA6Q9UF33 1036 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 KCND3Q9UK17 655 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 CROTQ9UKG9 612 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 TMPRSS11EQ9UL52 423 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 SPO11Q9Y5K1 396 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9□□□□□ -0.97
NIF3L1-203ENST00000409129 KCNMB2Q9Y691 235 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 AKAP9Q99996 3911 aa9□□□□□ -0.97
NIF3L1-203ENST00000409129 NAV3Q8IVL0 2385 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 A0A0A6YYK5 440 aaPredicted RBP8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 GOLGA6L3A6NEY3 463 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 K7EM74 188 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 KCNJ13O60928 360 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 PMPCBO75439 489 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 CLDN1O95832 211 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 RECKO95980 971 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 MT-ND3P03897 115 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 FURINP09958 794 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 CCNYL3P0C7X3 344 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 NELFEP18615 380 aaKnown RBP8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 HMGCLP35914 325 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 CAPZBP47756 277 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 DRG2P55039 364 aaKnown RBP8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 KLRB1Q12918 225 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 GTF2H3Q13889 308 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 ERV3-1Q14264 604 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 ATP13A5Q4VNC0 1218 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 LRRC38Q5VT99 294 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 IRGCQ6NXR0 463 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 FAM92BQ6ZTR7 304 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 PPP1R3BQ86XI6 285 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 RFX6Q8HWS3 928 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 TICAM1Q8IUC6 712 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 TRAPPC5Q8IUR0 188 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 GDAP1Q8TB36 358 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 DTX3LQ8TDB6 740 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 BRSK1Q8TDC3 778 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 RSC1A1Q92681 617 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 TEKT5Q96M29 485 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 TTC25Q96NG3 672 aa8.99□□□□□ -0.97
NIF3L1-203ENST00000409129 PRR14Q9BWN1 585 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms