RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 TBC1D17Q9HA65 648 aa26.43■■□□□ 1.82
MSX1-201ENST00000382723 KLF11O14901 512 aa26.42■■□□□ 1.82
MSX1-201ENST00000382723 ATG13O75143 517 aa26.42■■□□□ 1.82
MSX1-201ENST00000382723 CDK14O94921 469 aa26.42■■□□□ 1.82
MSX1-201ENST00000382723 DGKAP23743 735 aa26.42■■□□□ 1.82
MSX1-201ENST00000382723 INPP5AQ14642 412 aa26.42■■□□□ 1.82
MSX1-201ENST00000382723 ADAMTSL4Q6UY14 1074 aa26.42■■□□□ 1.82
MSX1-201ENST00000382723 ADGRG6Q86SQ4 1221 aa26.42■■□□□ 1.82
MSX1-201ENST00000382723 TP53I13Q8NBR0 393 aaPredicted RBP26.42■■□□□ 1.82
MSX1-201ENST00000382723 RAB3IL1Q8TBN0 382 aa26.42■■□□□ 1.82
MSX1-201ENST00000382723 SREK1Q8WXA9 508 aaKnown RBP26.42■■□□□ 1.82
MSX1-201ENST00000382723 KIAA1191Q96A73 305 aa26.42■■□□□ 1.82
MSX1-201ENST00000382723 NELL2Q99435 816 aa26.42■■□□□ 1.82
MSX1-201ENST00000382723 ACSS2Q9NR19 701 aa26.42■■□□□ 1.82
MSX1-201ENST00000382723 FAM8A1Q9UBU6 413 aa26.42■■□□□ 1.82
MSX1-201ENST00000382723 MUTYHQ9UIF7 546 aa26.42■■□□□ 1.82
MSX1-201ENST00000382723 TRIM13O60858 407 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 RGS4P49798 205 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 BOP1Q14137 746 aaKnown RBP26.41■■□□□ 1.82
MSX1-201ENST00000382723 TTLL9Q3SXZ7 439 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 TMEM220Q6QAJ8 160 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 TSTD1Q8NFU3 115 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 ZCCHC2Q9C0B9 1178 aaKnown RBP26.41■■□□□ 1.82
MSX1-201ENST00000382723 BTBD1Q9H0C5 482 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 TRIM39Q9HCM9 518 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 CYP4F12Q9HCS2 524 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 ITM2CQ9NQX7 267 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 LATS2Q9NRM7 1088 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 RNF112Q9ULX5 631 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 EDF1O60869 148 aaKnown RBP26.41■■□□□ 1.82
MSX1-201ENST00000382723 SERPINE1P05121 402 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 ATP5F1P24539 256 aaPredicted RBP26.41■■□□□ 1.82
MSX1-201ENST00000382723 AOAHP28039 575 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 NEK5Q6P3R8 708 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 STAG3L4Q8TBR4 150 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 ELMO1Q92556 727 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 MOCOSQ96EN8 888 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 MYOCQ99972 504 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 ELAC2Q9BQ52 826 aaKnown RBP26.41■■□□□ 1.82
MSX1-201ENST00000382723 FZD3Q9NPG1 666 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 ATXN10Q9UBB4 475 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 TMEM98Q9Y2Y6 226 aa26.41■■□□□ 1.82
MSX1-201ENST00000382723 RAD51BO15315 384 aa26.4■■□□□ 1.82
MSX1-201ENST00000382723 SLC31A1O15431 190 aa26.4■■□□□ 1.82
MSX1-201ENST00000382723 FTH1P02794 183 aa26.4■■□□□ 1.82
MSX1-201ENST00000382723 HSPA14Q0VDF9 509 aa26.4■■□□□ 1.82
MSX1-201ENST00000382723 LIPMQ5VYY2 423 aa26.4■■□□□ 1.82
MSX1-201ENST00000382723 DOK6Q6PKX4 331 aa26.4■■□□□ 1.82
MSX1-201ENST00000382723 RHEBL1Q8TAI7 183 aa26.4■■□□□ 1.82
MSX1-201ENST00000382723 LGR4Q9BXB1 951 aa26.4■■□□□ 1.82
MSX1-201ENST00000382723 OR1A2Q9Y585 309 aa26.4■■□□□ 1.82
MSX1-201ENST00000382723 F8W8V4 182 aa26.39■■□□□ 1.82
MSX1-201ENST00000382723 QSOX1O00391 747 aa26.39■■□□□ 1.82
MSX1-201ENST00000382723 CDK3Q00526 305 aa26.39■■□□□ 1.82
MSX1-201ENST00000382723 MYO1HQ8N1T3 1032 aa26.39■■□□□ 1.82
MSX1-201ENST00000382723 PHF21BQ96EK2 531 aa26.39■■□□□ 1.82
MSX1-201ENST00000382723 THOC1Q96FV9 657 aaKnown RBP26.39■■□□□ 1.82
MSX1-201ENST00000382723 PDLIM5Q96HC4 596 aaKnown RBP26.39■■□□□ 1.82
MSX1-201ENST00000382723 ATOH8Q96SQ7 321 aa26.39■■□□□ 1.82
MSX1-201ENST00000382723 C1QTNF7Q9BXJ2 289 aa26.39■■□□□ 1.82
MSX1-201ENST00000382723 KDM4CQ9H3R0 1056 aa26.39■■□□□ 1.82
MSX1-201ENST00000382723 USP36Q9P275 1121 aaKnown RBP26.39■■□□□ 1.82
MSX1-201ENST00000382723 CYP8B1Q9UNU6 501 aa26.39■■□□□ 1.82
MSX1-201ENST00000382723 A8MT66 165 aa26.39■■□□□ 1.81
MSX1-201ENST00000382723 UBXN8O00124 270 aa26.39■■□□□ 1.81
MSX1-201ENST00000382723 KERAO60938 352 aa26.39■■□□□ 1.81
MSX1-201ENST00000382723 LYPLA1O75608 230 aaPredicted RBP26.39■■□□□ 1.81
MSX1-201ENST00000382723 PBLDP30039 288 aaPredicted RBP26.39■■□□□ 1.81
MSX1-201ENST00000382723 PRLHRP49683 370 aa26.39■■□□□ 1.81
MSX1-201ENST00000382723 OVGP1Q12889 678 aa26.39■■□□□ 1.81
MSX1-201ENST00000382723 GTF2H3Q13889 308 aa26.39■■□□□ 1.81
MSX1-201ENST00000382723 MAP7D1Q3KQU3 841 aa26.39■■□□□ 1.81
MSX1-201ENST00000382723 COX14Q96I36 57 aa26.39■■□□□ 1.81
MSX1-201ENST00000382723 C20orf27Q9GZN8 174 aa26.39■■□□□ 1.81
MSX1-201ENST00000382723 TMEM202A6NGA9 273 aa26.38■■□□□ 1.81
MSX1-201ENST00000382723 LRRC72A6NJI9 287 aa26.38■■□□□ 1.81
MSX1-201ENST00000382723 ITM2AO43736 263 aa26.38■■□□□ 1.81
MSX1-201ENST00000382723 SMIM24O75264 130 aa26.38■■□□□ 1.81
MSX1-201ENST00000382723 SLC1A6P48664 564 aa26.38■■□□□ 1.81
MSX1-201ENST00000382723 NAGLUP54802 743 aa26.38■■□□□ 1.81
MSX1-201ENST00000382723 CGB2Q6NT52 195 aa26.38■■□□□ 1.81
MSX1-201ENST00000382723 TRAPPC5Q8IUR0 188 aa26.38■■□□□ 1.81
MSX1-201ENST00000382723 OR2T34Q8NGX1 318 aa26.38■■□□□ 1.81
MSX1-201ENST00000382723 FUBP1Q96AE4 644 aaKnown RBP26.38■■□□□ 1.81
MSX1-201ENST00000382723 GATA5Q9BWX5 397 aaPredicted RBP26.38■■□□□ 1.81
MSX1-201ENST00000382723 WDR26Q9H7D7 661 aa26.38■■□□□ 1.81
MSX1-201ENST00000382723 KLHL42Q9P2K6 505 aa26.38■■□□□ 1.81
MSX1-201ENST00000382723 TRPM6Q9BX84 2022 aa26.38■■□□□ 1.81
MSX1-201ENST00000382723 SUPT3HB4E1H0 165 aa26.37■■□□□ 1.81
MSX1-201ENST00000382723 SUPT3HO75486 399 aa26.37■■□□□ 1.81
MSX1-201ENST00000382723 ZNF8P17098 575 aaPredicted RBP26.37■■□□□ 1.81
MSX1-201ENST00000382723 GRK2P25098 689 aa26.37■■□□□ 1.81
MSX1-201ENST00000382723 CCM2Q9BSQ5 444 aa26.37■■□□□ 1.81
MSX1-201ENST00000382723 SGK2Q9HBY8 427 aa26.37■■□□□ 1.81
MSX1-201ENST00000382723 VEGFDO43915 354 aa26.37■■□□□ 1.81
MSX1-201ENST00000382723 SNNO75324 88 aaPredicted RBP26.37■■□□□ 1.81
MSX1-201ENST00000382723 TPBGLP0DKB5 382 aa26.37■■□□□ 1.81
MSX1-201ENST00000382723 NUMA1Q14980 2115 aa26.37■■□□□ 1.81
MSX1-201ENST00000382723 CCNYL1Q8N7R7 359 aa26.37■■□□□ 1.81
MSX1-201ENST00000382723 PJA1Q8NG27 643 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms