RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ZNF671Q8TAW3 534 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 COL26A1Q96A83 441 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 TEPSINQ96N21 525 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 HEPHQ9BQS7 1158 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 PCDH12Q9NPG4 1184 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 SNX15Q9NRS6 342 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 A0A1W2PRU2 124 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 LYPLA1O75608 230 aaPredicted RBP13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 ITGA2P17301 1181 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 HOXB6P17509 224 aaKnown RBP13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 RABGGTBP53611 331 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 ATP6V0D1P61421 351 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 TYSND1Q2T9J0 566 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 NDUFAF6Q330K2 333 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 PYDC2Q56P42 97 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 OTOP3Q7RTS5 596 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 CCDC185Q8N715 623 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 LINGO1Q96FE5 620 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 APOBEC3GQ9HC16 384 aaKnown RBP13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 INTS7Q9NVH2 962 aaKnown RBP13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 CNTN3Q9P232 1028 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 ATG13O75143 517 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 L1CAMP32004 1257 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 SPAM1P38567 509 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 MAPKAPK3Q16644 382 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 SNAP47Q5SQN1 464 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 RNF220Q5VTB9 566 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 AADACL4Q5VUY2 407 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 CIR1Q86X95 450 aaPredicted RBP13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 CCDC28AQ8IWP9 274 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 IZUMO1Q8IYV9 350 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 KIAA1143Q96AT1 154 aaPredicted RBP13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 PNPLA8Q9NP80 782 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 SLC28A1O00337 649 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 EPHA3P29320 983 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 CTBP1Q13363 440 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 RHBDF2Q6PJF5 856 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 DNAJB7Q7Z6W7 309 aaPredicted RBP13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 ZFP28Q8NHY6 868 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 HMCESQ96FZ2 354 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 LPIN3Q9BQK8 851 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 MECRQ9BV79 373 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 HERC2P3Q9BVR0 1158 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 YIPF1Q9Y548 306 aa13.2□□□□□ -0.3
RAPGEF1-201ENST00000372189 OR10H2O60403 315 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 SOWAHAQ2M3V2 549 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 LIN52Q52LA3 116 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 OR5J2Q8NH18 312 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 SH3RF2Q8TEC5 729 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 AKAP1Q92667 903 aaKnown RBP eCLIP13.19□□□□□ -0.37e-7■■■■□ 24.9
RAPGEF1-201ENST00000372189 PNPOQ9NVS9 261 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 CCRL2O00421 344 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 SNX4O95219 450 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 PIGRP01833 764 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 MYCLP1P12525 358 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 IDO1P14902 403 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 POLD2P49005 469 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 CEBPGP53567 150 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 NAT14Q8WUY8 206 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 RAPGEFL1Q9UHV5 662 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 ERGIC3Q9Y282 383 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 FCF1Q9Y324 198 aaKnown RBP13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 PMF1-BGLAPU3KQ54 211 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 C5orf60A6NFR6 353 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 H3BNX3 289 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 RASGRP1O95267 797 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 NDST3O95803 873 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 RPL19P84098 196 aaKnown RBP13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 PACS1Q6VY07 963 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 OR7D4Q8NG98 312 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 WFIKKN2Q8TEU8 576 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 TFAP2BQ92481 460 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 AP3S1Q92572 193 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 HOPXQ9BPY8 73 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 PSD2Q9BQI7 771 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 COMMD9Q9P000 198 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 FBXO5Q9UKT4 447 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 PCDHGA1Q9Y5H4 931 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 SQORQ9Y6N5 450 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 AIPO00170 330 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 IDSP22304 550 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 CRHR1P34998 444 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 CRATP43155 626 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 JAM2P57087 298 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 GALNT13Q8IUC8 556 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 DSELQ8IZU8 1212 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 WRAP53Q9BUR4 548 aaKnown RBP13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 DNAJC28Q9NX36 388 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 FBXW11Q9UKB1 542 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 HGFP14210 728 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 CLK3P49761 638 aaKnown RBP13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 TMEM192Q8IY95 271 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 TBC1D21Q8IYX1 336 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 FAM47BQ8NA70 645 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 MOSPD2Q8NHP6 518 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 NELL1Q92832 810 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 CLIP3Q96DZ5 547 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 VPS35Q96QK1 796 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 TMEM109Q9BVC6 243 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 GIN1Q9NXP7 522 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms