RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 UBXN4Q92575 508 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 ALG3Q92685 438 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 CAPZA3Q96KX2 299 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 C9orf72Q96LT7 481 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 TIMM29Q9BSF4 260 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 TBC1D10AQ9BXI6 508 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 SPRY4Q9C004 299 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 ZFYVE1Q9HBF4 777 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 APMAPQ9HDC9 416 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 ZNF71Q9NQZ8 489 aaPredicted RBP12.22□□□□□ -0.45
MRPL55-209ENST00000366735 KLC4Q9NSK0 619 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 NFKBIL1Q9UBC1 381 aaPredicted RBP12.22□□□□□ -0.45
MRPL55-209ENST00000366735 POLHQ9Y253 713 aa12.22□□□□□ -0.45
MRPL55-209ENST00000366735 KMOO15229 486 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 PSTPIP1O43586 416 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 VEGFDO43915 354 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 CEP104O60308 925 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 C9P02748 559 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 CCNYL3P0C7X3 344 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 IL4RP24394 825 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 DLSTP36957 453 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 TNNT3P45378 269 aaPredicted RBP12.21□□□□□ -0.45
MRPL55-209ENST00000366735 UBE2IP63279 158 aaKnown RBP12.21□□□□□ -0.45
MRPL55-209ENST00000366735 GTF2H3Q13889 308 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 CCDC70Q6NSX1 233 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 CRTC3Q6UUV7 619 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 TMEM26Q6ZUK4 368 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 TIPARPQ7Z3E1 657 aaKnown RBP12.21□□□□□ -0.45
MRPL55-209ENST00000366735 UNC5BQ8IZJ1 945 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 TRAM1L1Q8N609 369 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 ARRDC2Q8TBH0 407 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.21□□□□□ -0.45
MRPL55-209ENST00000366735 KRT35Q92764 455 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 ZDHHC12Q96GR4 267 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 ABHD17AQ96GS6 310 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 TGM7Q96PF1 710 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 SMIM14Q96QK8 99 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 OR2AG1Q9H205 316 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 ZNF768Q9H5H4 540 aaKnown RBP12.21□□□□□ -0.45
MRPL55-209ENST00000366735 TRIM39Q9HCM9 518 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 SIDT1Q9NXL6 827 aaKnown RBP12.21□□□□□ -0.45
MRPL55-209ENST00000366735 ATXN10Q9UBB4 475 aa12.21□□□□□ -0.45
MRPL55-209ENST00000366735 CNOT6Q9ULM6 557 aaKnown RBP12.21□□□□□ -0.45
MRPL55-209ENST00000366735 PRR19A6NJB7 356 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 PGRMC1O00264 195 aaKnown RBP12.2□□□□□ -0.46
MRPL55-209ENST00000366735 PPP1R12AO14974 1030 aaPredicted RBP12.2□□□□□ -0.46
MRPL55-209ENST00000366735 PRLP01236 227 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 SLC4A1P02730 911 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 ZNF16P17020 682 aaPredicted RBP12.2□□□□□ -0.46
MRPL55-209ENST00000366735 ZNF8P17098 575 aaPredicted RBP12.2□□□□□ -0.46
MRPL55-209ENST00000366735 HALP42357 657 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 CAPZBP47756 277 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 ARSEP51690 589 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 GFERP55789 205 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 RWDD2BP57060 319 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 IFI35P80217 286 aaPredicted RBP12.2□□□□□ -0.46
MRPL55-209ENST00000366735 SRSF1Q07955 248 aaKnown RBP eCLIP12.2□□□□□ -0.46
MRPL55-209ENST00000366735 PPIDQ08752 370 aaKnown RBP12.2□□□□□ -0.46
MRPL55-209ENST00000366735 NIPAL4Q0D2K0 466 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 GALNT3Q14435 633 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 PLA2G4EQ3MJ16 856 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 ODF2Q5BJF6 829 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 ALS2CLQ60I27 953 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 KLHL35Q6PF15 583 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 PRSS42Q7Z5A4 293 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 PPP1R3BQ86XI6 285 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 CPNE8Q86YQ8 564 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 RHOT1Q8IXI2 618 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 KATNAL2Q8IYT4 538 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 MMGT1Q8N4V1 131 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 TEX19Q8NA77 164 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 SPATA4Q8NEY3 305 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 GLYATL1Q969I3 302 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 FAF2Q96CS3 445 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 CXorf40BQ96DE9 158 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 MS4A14Q96JA4 679 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 PLEKHG4BQ96PX9 1271 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 NAP1L3Q99457 506 aaPredicted RBP12.2□□□□□ -0.46
MRPL55-209ENST00000366735 GPR63Q9BZJ6 419 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 ZCCHC2Q9C0B9 1178 aaKnown RBP12.2□□□□□ -0.46
MRPL55-209ENST00000366735 MAGEE1Q9HCI5 957 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 PRDM8Q9NQV8 689 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 CROTQ9UKG9 612 aa12.2□□□□□ -0.46
MRPL55-209ENST00000366735 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.2□□□□□ -0.46
MRPL55-209ENST00000366735 PCYT1BQ9Y5K3 369 aaPredicted RBP12.2□□□□□ -0.46
MRPL55-209ENST00000366735 ZNF487B1APH4 448 aa12.19□□□□□ -0.46
MRPL55-209ENST00000366735 CHUKO15111 745 aa12.19□□□□□ -0.46
MRPL55-209ENST00000366735 RFPL1O75677 317 aa12.19□□□□□ -0.46
MRPL55-209ENST00000366735 JCHAINP01591 159 aa12.19□□□□□ -0.46
MRPL55-209ENST00000366735 GP1BBP13224 206 aa12.19□□□□□ -0.46
MRPL55-209ENST00000366735 ZNF7P17097 686 aaPredicted RBP12.19□□□□□ -0.46
MRPL55-209ENST00000366735 TYRP1P17643 537 aa12.19□□□□□ -0.46
MRPL55-209ENST00000366735 IDSP22304 550 aa12.19□□□□□ -0.46
MRPL55-209ENST00000366735 MARCKSL1P49006 195 aa12.19□□□□□ -0.46
MRPL55-209ENST00000366735 GBE1Q04446 702 aa12.19□□□□□ -0.46
MRPL55-209ENST00000366735 AP1B1Q10567 949 aa12.19□□□□□ -0.46
MRPL55-209ENST00000366735 SLC14A2Q15849 920 aa12.19□□□□□ -0.46
MRPL55-209ENST00000366735 SEPT7Q16181 437 aaKnown RBP12.19□□□□□ -0.46
MRPL55-209ENST00000366735 ERCC6LQ2NKX8 1250 aa12.19□□□□□ -0.46
MRPL55-209ENST00000366735 FAM26EQ8N5C1 309 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms