RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 CDT1Q9H211 546 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 RHOJQ9H4E5 214 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 CTPS2Q9NRF8 586 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 CHRAC1Q9NRG0 131 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.88■□□□□ 0.131e-6■■■■□ 26.2
COL18A1-203ENST00000359759 IQSEC2Q5JU85 1478 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 CACNB4O00305 520 aaPredicted RBP15.88■□□□□ 0.13
COL18A1-203ENST00000359759 ENPP3O14638 875 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 OR1I1O60431 355 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 IFNW1P05000 195 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 ANXA4P09525 319 aaPredicted RBP15.88■□□□□ 0.13
COL18A1-203ENST00000359759 SMAD3P84022 425 aaKnown RBP15.88■□□□□ 0.13
COL18A1-203ENST00000359759 DDR1Q08345 913 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 ASB18Q6ZVZ8 466 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 ZNF548Q8NEK5 533 aaPredicted RBP15.88■□□□□ 0.13
COL18A1-203ENST00000359759 PIGXQ8TBF5 258 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 OR8D1Q8WZ84 308 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 CXorf21Q9HAI6 301 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 KCNQ5Q9NR82 932 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 TVP23BQ9NYZ1 205 aa15.88■□□□□ 0.13
COL18A1-203ENST00000359759 TTC34A8MYJ7 566 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 PPM1AP35813 382 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 WASP42768 502 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 PSMD8P48556 350 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 RPL6Q02878 288 aaKnown RBP15.87■□□□□ 0.13
COL18A1-203ENST00000359759 EFR3AQ14156 821 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 NOMO2Q5JPE7 1267 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 TMEM214Q6NUQ4 689 aaKnown RBP15.87■□□□□ 0.13
COL18A1-203ENST00000359759 ZYG11AQ6WRX3 759 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 UFD1Q92890 307 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 HSFY1Q96LI6 401 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 B3GNT4Q9C0J1 378 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 COQ10BQ9H8M1 238 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 IPPKQ9H8X2 491 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 GIN1Q9NXP7 522 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 ORC5O43913 435 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 MFSD11O43934 449 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 NME6O75414 186 aaPredicted RBP15.87■□□□□ 0.13
COL18A1-203ENST00000359759 CLDN9O95484 217 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 AHCYP23526 432 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 CD83Q01151 205 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 COLEC12Q5KU26 742 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 LINGO4Q6UY18 593 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 ZNF781Q8N8C0 355 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 MINDY2Q8NBR6 621 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 PDPRQ8NCN5 879 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 SLC44A1Q8WWI5 657 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 NMUR1Q9HB89 426 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 PDE10AQ9Y233 779 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 RIMBP3CA6NJZ7 1639 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 RIMBP3BA6NNM3 1639 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 RIMBP3Q9UFD9 1639 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 RPLP0P05388 317 aaKnown RBP15.87■□□□□ 0.13
COL18A1-203ENST00000359759 IST1P53990 364 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 ADAM8P78325 824 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 PGAM4Q8N0Y7 254 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 WDR18Q9BV38 432 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 H3BSH0 61 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 NRLP54845 237 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 PHYKPLQ8IUZ5 450 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 WRAP53Q9BUR4 548 aaKnown RBP15.87■□□□□ 0.13
COL18A1-203ENST00000359759 EHD1Q9H4M9 534 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 TRPS1Q9UHF7 1281 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 SPEF1Q9Y4P9 236 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 DDNO94850 711 aaPredicted RBP15.87■□□□□ 0.13
COL18A1-203ENST00000359759 IDH3AP50213 366 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 CAPSQ13938 189 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 PUM1Q14671 1186 aaKnown RBP eCLIP15.87■□□□□ 0.133e-8■□□□□ 10.9
COL18A1-203ENST00000359759 TMEM161BQ8NDZ6 487 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 EZH1Q92800 747 aaPredicted RBP15.87■□□□□ 0.13
COL18A1-203ENST00000359759 AZIN2Q96A70 460 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 GAL3ST4Q96RP7 486 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 EVA1BQ9NVM1 165 aa15.87■□□□□ 0.13
COL18A1-203ENST00000359759 OR2AG2A6NM03 316 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 TLR5O60602 858 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 FCER2P06734 321 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 GTF2BQ00403 316 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 ALG1LQ6GMV1 187 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 PSRC1Q6PGN9 363 aaPredicted RBP15.86■□□□□ 0.13
COL18A1-203ENST00000359759 AMIGO1Q86WK6 493 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 SIDT2Q8NBJ9 832 aaKnown RBP15.86■□□□□ 0.13
COL18A1-203ENST00000359759 EFCAB9A8MZ26 197 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 M0R036 132 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 DGKZQ13574 1117 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 ATP13A5Q4VNC0 1218 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 ADNP2Q6IQ32 1131 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 CES5AQ6NT32 575 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 USP43Q70EL4 1123 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 TMC8Q8IU68 726 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 GLOD4Q9HC38 313 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 TCF7L1Q9HCS4 588 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 PCDHGB3Q9Y5G1 929 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 DDX6P26196 483 aaKnown RBP eCLIP15.86■□□□□ 0.131e-8■□□□□ 11.1
COL18A1-203ENST00000359759 PTPN9P43378 593 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 CHAF1BQ13112 559 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 MAP1SQ66K74 1059 aaPredicted RBP15.86■□□□□ 0.13
COL18A1-203ENST00000359759 ASB12Q8WXK4 309 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 EVLQ9UI08 416 aaPredicted RBP15.86■□□□□ 0.13
COL18A1-203ENST00000359759 MAN2B2Q9Y2E5 1009 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 PEX16Q9Y5Y5 336 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms