RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 ACP5P13686 325 aa15.01□□□□□ -0.01
TPM1-206ENST00000358278 PKMP14618 531 aaKnown RBP15.01□□□□□ -0.01
TPM1-206ENST00000358278 VCLP18206 1134 aa15.01□□□□□ -0.01
TPM1-206ENST00000358278 GABRB3P28472 473 aa15.01□□□□□ -0.01
TPM1-206ENST00000358278 GP5P40197 560 aa15.01□□□□□ -0.01
TPM1-206ENST00000358278 SF3A2Q15428 464 aaKnown RBP15.01□□□□□ -0.01
TPM1-206ENST00000358278 ZNF423Q2M1K9 1284 aa15.01□□□□□ -0.01
TPM1-206ENST00000358278 MREGQ8N565 214 aa15.01□□□□□ -0.01
TPM1-206ENST00000358278 GPATCH11Q8N954 259 aa15.01□□□□□ -0.01
TPM1-206ENST00000358278 BIRC8Q96P09 236 aa15.01□□□□□ -0.01
TPM1-206ENST00000358278 CCDC77Q9BR77 488 aa15.01□□□□□ -0.01
TPM1-206ENST00000358278 TMEM168Q9H0V1 697 aa15.01□□□□□ -0.01
TPM1-206ENST00000358278 TM7SF3Q9NS93 570 aa15.01□□□□□ -0.01
TPM1-206ENST00000358278 SEMA4GQ9NTN9 838 aa15.01□□□□□ -0.01
TPM1-206ENST00000358278 ARGLU1Q9NWB6 273 aaPredicted RBP15.01□□□□□ -0.01
TPM1-206ENST00000358278 FAM8A1Q9UBU6 413 aa15.01□□□□□ -0.01
TPM1-206ENST00000358278 UQCRHLA0A096LP55 91 aa15□□□□□ -0.01
TPM1-206ENST00000358278 H3BMM5 538 aa15□□□□□ -0.01
TPM1-206ENST00000358278 SGTAO43765 313 aa15□□□□□ -0.01
TPM1-206ENST00000358278 SDC3O75056 442 aa15□□□□□ -0.01
TPM1-206ENST00000358278 UQCRHP07919 91 aa15□□□□□ -0.01
TPM1-206ENST00000358278 INHBAP08476 426 aa15□□□□□ -0.01
TPM1-206ENST00000358278 CSE1LP55060 971 aaKnown RBP15□□□□□ -0.01
TPM1-206ENST00000358278 IL9RQ01113 521 aa15□□□□□ -0.01
TPM1-206ENST00000358278 ILF3Q12906 894 aaKnown RBP eCLIP15□□□□□ -0.01
TPM1-206ENST00000358278 LRP8Q14114 963 aa15□□□□□ -0.01
TPM1-206ENST00000358278 CTSL3PQ5NE16 218 aa15□□□□□ -0.01
TPM1-206ENST00000358278 PANX3Q96QZ0 392 aa15□□□□□ -0.01
TPM1-206ENST00000358278 PHOX2BQ99453 314 aa15□□□□□ -0.01
TPM1-206ENST00000358278 PAFAH2Q99487 392 aa15□□□□□ -0.01
TPM1-206ENST00000358278 NDNQ99608 321 aa15□□□□□ -0.01
TPM1-206ENST00000358278 RBBP8Q99708 897 aa15□□□□□ -0.01
TPM1-206ENST00000358278 TIMM29Q9BSF4 260 aa15□□□□□ -0.01
TPM1-206ENST00000358278 LRRC61Q9BV99 259 aa15□□□□□ -0.01
TPM1-206ENST00000358278 OSGEPL1Q9H4B0 414 aa15□□□□□ -0.01
TPM1-206ENST00000358278 RHOJQ9H4E5 214 aa15□□□□□ -0.01
TPM1-206ENST00000358278 CAAP1Q9H8G2 361 aa15□□□□□ -0.01
TPM1-206ENST00000358278 TRNAU1APQ9NX07 287 aaKnown RBP15□□□□□ -0.01
TPM1-206ENST00000358278 SPASTQ9UBP0 616 aa15□□□□□ -0.01
TPM1-206ENST00000358278 CORO1CQ9ULV4 474 aaPredicted RBP15□□□□□ -0.01
TPM1-206ENST00000358278 DNAJC16Q9Y2G8 782 aa15□□□□□ -0.01
TPM1-206ENST00000358278 COMMD10Q9Y6G5 202 aa15□□□□□ -0.01
TPM1-206ENST00000358278 YKT6O15498 198 aa15□□□□□ -0.01
TPM1-206ENST00000358278 NIPSNAP2O75323 286 aa15□□□□□ -0.01
TPM1-206ENST00000358278 POP7O75817 140 aaKnown RBP15□□□□□ -0.01
TPM1-206ENST00000358278 FAM155BO75949 473 aa15□□□□□ -0.01
TPM1-206ENST00000358278 TRIM16O95361 564 aa15□□□□□ -0.01
TPM1-206ENST00000358278 ITGB6P18564 788 aa15□□□□□ -0.01
TPM1-206ENST00000358278 RXRGP48443 463 aa15□□□□□ -0.01
TPM1-206ENST00000358278 CCT8P50990 548 aa15□□□□□ -0.01
TPM1-206ENST00000358278 ILF2Q12905 390 aaKnown RBP15□□□□□ -0.01
TPM1-206ENST00000358278 ELOCQ15369 112 aa15□□□□□ -0.01
TPM1-206ENST00000358278 CSRP2Q16527 193 aa15□□□□□ -0.01
TPM1-206ENST00000358278 GRTP1Q5TC63 336 aa15□□□□□ -0.01
TPM1-206ENST00000358278 C11orf96Q7Z7L8 435 aa15□□□□□ -0.01
TPM1-206ENST00000358278 AMZ2Q86W34 360 aa15□□□□□ -0.01
TPM1-206ENST00000358278 ZC3HC1Q86WB0 502 aaKnown RBP15□□□□□ -0.01
TPM1-206ENST00000358278 KRT222Q8N1A0 295 aa15□□□□□ -0.01
TPM1-206ENST00000358278 MINDY1Q8N5J2 469 aa15□□□□□ -0.01
TPM1-206ENST00000358278 ZNF548Q8NEK5 533 aaPredicted RBP15□□□□□ -0.01
TPM1-206ENST00000358278 OR2I1PQ8NGU4 316 aa15□□□□□ -0.01
TPM1-206ENST00000358278 LMX1AQ8TE12 382 aa15□□□□□ -0.01
TPM1-206ENST00000358278 FAM136AQ96C01 138 aa15□□□□□ -0.01
TPM1-206ENST00000358278 VPS39Q96JC1 886 aa15□□□□□ -0.01
TPM1-206ENST00000358278 CCM2Q9BSQ5 444 aa15□□□□□ -0.01
TPM1-206ENST00000358278 KLC4Q9NSK0 619 aa15□□□□□ -0.01
TPM1-206ENST00000358278 KCNK6Q9Y257 313 aa15□□□□□ -0.01
TPM1-206ENST00000358278 DNMT3AQ9Y6K1 912 aaPredicted RBP15□□□□□ -0.01
TPM1-206ENST00000358278 A0A1B0GTQ1 180 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 KLHL33A6NCF5 533 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 IQCF5A8MTL0 148 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 AQP9O43315 295 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 PIAS2O75928 621 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 CHRM3P20309 590 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 SPRP35270 261 aaPredicted RBP14.99□□□□□ -0.01
TPM1-206ENST00000358278 MSH2P43246 934 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 CTBSQ01459 385 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 C1orf61Q13536 156 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 BOP1Q14137 746 aaKnown RBP14.99□□□□□ -0.01
TPM1-206ENST00000358278 RBM20Q5T481 1227 aaKnown RBP14.99□□□□□ -0.01
TPM1-206ENST00000358278 ZNF549Q6P9A3 640 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 SLC30A9Q6PML9 568 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 TAOK1Q7L7X3 1001 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 FSTL5Q8N475 847 aaPredicted RBP14.99□□□□□ -0.01
TPM1-206ENST00000358278 HNRNPLLQ8WVV9 542 aaKnown RBP14.99□□□□□ -0.01
TPM1-206ENST00000358278 SLC44A1Q8WWI5 657 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 ELMO1Q92556 727 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 ELMO2Q96JJ3 720 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 LINC00615Q96LM1 132 aaPredicted RBP14.99□□□□□ -0.01
TPM1-206ENST00000358278 AARSD1Q9BTE6 412 aaKnown RBP14.99□□□□□ -0.01
TPM1-206ENST00000358278 EDEM2Q9BV94 578 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 GSDMCQ9BYG8 508 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 IL21RQ9HBE5 538 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 SARS2Q9NP81 518 aaKnown RBP14.99□□□□□ -0.01
TPM1-206ENST00000358278 DOLKQ9UPQ8 538 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 PLEKHM1Q9Y4G2 1056 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 GVINP1Q7Z2Y8 2422 aa14.99□□□□□ -0.01
TPM1-206ENST00000358278 FAM95CA0A1B0GW59 222 aa14.98□□□□□ -0.01
TPM1-206ENST00000358278 MGAT4DA6NG13 374 aa14.98□□□□□ -0.01
TPM1-206ENST00000358278 SHBGP04278 402 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms