RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 DDHD1Q8NEL9 900 aa15.55■□□□□ 0.08
PDGFA-201ENST00000354513 DTX3LQ8TDB6 740 aa15.55■□□□□ 0.08
PDGFA-201ENST00000354513 MAK16Q9BXY0 300 aaKnown RBP15.55■□□□□ 0.08
PDGFA-201ENST00000354513 AKIRIN1Q9H9L7 192 aaPredicted RBP15.55■□□□□ 0.08
PDGFA-201ENST00000354513 UGT1A7Q9HAW7 530 aa15.55■□□□□ 0.08
PDGFA-201ENST00000354513 UGT1A10Q9HAW8 530 aa15.55■□□□□ 0.08
PDGFA-201ENST00000354513 UGT1A8Q9HAW9 530 aa15.55■□□□□ 0.08
PDGFA-201ENST00000354513 FAM153AQ9UHL3 310 aa15.55■□□□□ 0.08
PDGFA-201ENST00000354513 ANAPC2Q9UJX6 822 aa15.55■□□□□ 0.08
PDGFA-201ENST00000354513 TP53TG5Q9Y2B4 290 aa15.55■□□□□ 0.08
PDGFA-201ENST00000354513 MED13Q9UHV7 2174 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 CST8O60676 142 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 RASSF9O75901 435 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 NELFEP18615 380 aaKnown RBP15.54■□□□□ 0.08
PDGFA-201ENST00000354513 SPAM1P38567 509 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 MC1RQ01726 317 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 LAMB3Q13751 1172 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 NFE2L1Q14494 772 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 IL11RAQ14626 422 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 KCNAB1Q14722 419 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 RPE65Q16518 533 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 LACTB2Q53H82 288 aaPredicted RBP15.54■□□□□ 0.08
PDGFA-201ENST00000354513 GPRC6AQ5T6X5 926 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 IRGCQ6NXR0 463 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 FAM151BQ6UXP7 276 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 RBM12BQ8IXT5 1001 aaKnown RBP15.54■□□□□ 0.08
PDGFA-201ENST00000354513 SLC25A41Q8N5S1 370 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 CT55Q8WUE5 264 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 NAT14Q8WUY8 206 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 TFB1MQ8WVM0 346 aaKnown RBP15.54■□□□□ 0.08
PDGFA-201ENST00000354513 CXorf40BQ96DE9 158 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 SLC41A2Q96JW4 573 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 FCRL5Q96RD9 977 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 DDX56Q9NY93 547 aaKnown RBP15.54■□□□□ 0.08
PDGFA-201ENST00000354513 PSMD13Q9UNM6 376 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 PIKFYVEQ9Y2I7 2098 aa15.54■□□□□ 0.08
PDGFA-201ENST00000354513 hCG_1818297A0A087WSY0 165 aa15.53■□□□□ 0.08
PDGFA-201ENST00000354513 SGTAO43765 313 aa15.53■□□□□ 0.08
PDGFA-201ENST00000354513 PDGFAP04085 211 aa15.53■□□□□ 0.08
PDGFA-201ENST00000354513 FOLR1P15328 257 aa15.53■□□□□ 0.08
PDGFA-201ENST00000354513 FECHP22830 423 aa15.53■□□□□ 0.08
PDGFA-201ENST00000354513 SLC1A1P43005 524 aa15.53■□□□□ 0.08
PDGFA-201ENST00000354513 NR2C2P49116 596 aa15.53■□□□□ 0.08
PDGFA-201ENST00000354513 ERV3-1Q14264 604 aa15.53■□□□□ 0.08
PDGFA-201ENST00000354513 SLC1A5Q15758 541 aa15.53■□□□□ 0.08
PDGFA-201ENST00000354513 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.53■□□□□ 0.08
PDGFA-201ENST00000354513 DUS1LQ6P1R4 473 aaKnown RBP15.53■□□□□ 0.08
PDGFA-201ENST00000354513 RASGRP3Q8IV61 690 aa15.53■□□□□ 0.08
PDGFA-201ENST00000354513 BEND7Q8N7W2 519 aaPredicted RBP15.53■□□□□ 0.08
PDGFA-201ENST00000354513 HAUS1Q96CS2 278 aa15.53■□□□□ 0.08
PDGFA-201ENST00000354513 STAMBPL1Q96FJ0 436 aa15.53■□□□□ 0.08
PDGFA-201ENST00000354513 QKIQ96PU8 341 aaKnown RBP eCLIP15.53■□□□□ 0.08
PDGFA-201ENST00000354513 SRPK1Q96SB4 655 aaKnown RBP15.53■□□□□ 0.08
PDGFA-201ENST00000354513 TRABDQ9H4I3 376 aa15.53■□□□□ 0.08
PDGFA-201ENST00000354513 LNPEPQ9UIQ6 1025 aa15.53■□□□□ 0.08
PDGFA-201ENST00000354513 KCTD3Q9Y597 815 aa15.53■□□□□ 0.08
PDGFA-201ENST00000354513 PCDHGA6Q9Y5G7 932 aa15.53■□□□□ 0.08
PDGFA-201ENST00000354513 NAV2Q8IVL1 2488 aa15.53■□□□□ 0.08
PDGFA-201ENST00000354513 OR2AG2A6NM03 316 aa15.52■□□□□ 0.08
PDGFA-201ENST00000354513 PSTPIP1O43586 416 aa15.52■□□□□ 0.08
PDGFA-201ENST00000354513 POP7O75817 140 aaKnown RBP15.52■□□□□ 0.08
PDGFA-201ENST00000354513 EPOP01588 193 aa15.52■□□□□ 0.08
PDGFA-201ENST00000354513 EBLN1P0CF75 366 aa15.52■□□□□ 0.08
PDGFA-201ENST00000354513 HADHBP55084 474 aaKnown RBP15.52■□□□□ 0.08
PDGFA-201ENST00000354513 DNASE1L3Q13609 305 aa15.52■□□□□ 0.08
PDGFA-201ENST00000354513 GTF2H3Q13889 308 aa15.52■□□□□ 0.08
PDGFA-201ENST00000354513 KAZNQ674X7 775 aa15.52■□□□□ 0.08
PDGFA-201ENST00000354513 PWWP2BQ6NUJ5 590 aa15.52■□□□□ 0.08
PDGFA-201ENST00000354513 MICALCLQ6ZW33 695 aa15.52■□□□□ 0.08
PDGFA-201ENST00000354513 ZC3H18Q86VM9 953 aaKnown RBP15.52■□□□□ 0.08
PDGFA-201ENST00000354513 AMZ2Q86W34 360 aa15.52■□□□□ 0.08
PDGFA-201ENST00000354513 IPMKQ8NFU5 416 aa15.52■□□□□ 0.08
PDGFA-201ENST00000354513 GDAP1Q8TB36 358 aa15.52■□□□□ 0.08
PDGFA-201ENST00000354513 BLOC1S5Q8TDH9 187 aa15.52■□□□□ 0.08
PDGFA-201ENST00000354513 MRFAP1L1Q96HT8 127 aa15.52■□□□□ 0.08
PDGFA-201ENST00000354513 MAP3K3Q99759 626 aa15.52■□□□□ 0.08
PDGFA-201ENST00000354513 C10orf88Q9H8K7 445 aa15.52■□□□□ 0.08
PDGFA-201ENST00000354513 SMOXQ9NWM0 555 aa15.52■□□□□ 0.08
PDGFA-201ENST00000354513 TFR2Q9UP52 801 aa15.52■□□□□ 0.08
PDGFA-201ENST00000354513 CFAP20Q9Y6A4 193 aaKnown RBP15.52■□□□□ 0.08
PDGFA-201ENST00000354513 NUP210LQ5VU65 1888 aa15.52■□□□□ 0.08
PDGFA-201ENST00000354513 SHANK1Q9Y566 2161 aa15.52■□□□□ 0.07
PDGFA-201ENST00000354513 SNRNP200O75643 2136 aaKnown RBP15.51■□□□□ 0.07
PDGFA-201ENST00000354513 GLYATL1P3A0A0U1RQE8 302 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 SPOPO43791 374 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 PBLDP30039 288 aaPredicted RBP15.51■□□□□ 0.07
PDGFA-201ENST00000354513 TBX2Q13207 712 aaPredicted RBP15.51■□□□□ 0.07
PDGFA-201ENST00000354513 TUBB3Q13509 450 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 OLIG2Q13516 323 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 TFDP2Q14188 446 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 LDLRAP1Q5SW96 308 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 TMEM220Q6QAJ8 160 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 GLT6D1Q7Z4J2 308 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 PPP1R3BQ86XI6 285 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 BRSK1Q8TDC3 778 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 MIB2Q96AX9 1013 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 ZDHHC12Q96GR4 267 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 CCDC42Q96M95 316 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 PPM1MQ96MI6 270 aa15.51■□□□□ 0.07
PDGFA-201ENST00000354513 INSM2Q96T92 566 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms