RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 LRRC43Q8N309 656 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 CD200R1Q8TD46 325 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 NSMCE2Q96MF7 247 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 DEFB118Q96PH6 123 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 TDRD1Q9BXT4 1180 aaKnown RBP15.18■□□□□ 0.02
BRCC3-201ENST00000330045 SCUBE2Q9NQ36 999 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 TMEM45AQ9NWC5 275 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 PKD2L2Q9NZM6 624 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 ZNF639Q9UID6 485 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 FKBPLQ9UIM3 349 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 FAF1Q9UNN5 650 aaPredicted RBP15.18■□□□□ 0.02
BRCC3-201ENST00000330045 GREB1Q4ZG55 1949 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 ATN1P54259 1190 aaPredicted RBP15.18■□□□□ 0.02
BRCC3-201ENST00000330045 C5orf22Q49AR2 442 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 HABP4Q5JVS0 413 aaKnown RBP15.18■□□□□ 0.02
BRCC3-201ENST00000330045 FAM171A1Q5VUB5 890 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 USP51Q70EK9 711 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 SLC24A5Q71RS6 500 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 LYSMD3Q7Z3D4 306 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 LPCAT1Q8NF37 534 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 OR52B6Q8NGF0 335 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 ISG20Q96AZ6 181 aaKnown RBP15.18■□□□□ 0.02
BRCC3-201ENST00000330045 B3GALT6Q96L58 329 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 CDK15Q96Q40 435 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 ZNF382Q96SR6 550 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 DCUN1D5Q9BTE7 237 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 YTHDF1Q9BYJ9 559 aaKnown RBP15.18■□□□□ 0.02
BRCC3-201ENST00000330045 CRISPLD1Q9H336 500 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 SOX17Q9H6I2 414 aaPredicted RBP15.18■□□□□ 0.02
BRCC3-201ENST00000330045 ZFP37Q9Y6Q3 630 aaPredicted RBP15.18■□□□□ 0.02
BRCC3-201ENST00000330045 OR6C75A6NL08 312 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 ACSL4O60488 711 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 CR2P20023 1033 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 CD9P21926 228 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 OXCT1P55809 520 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 ERVPABLB-1P60509 514 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 ADARB1P78563 741 aaKnown RBP15.17■□□□□ 0.02
BRCC3-201ENST00000330045 RAB39AQ14964 217 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 ZRANB3Q5FWF4 1079 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 TBPL2Q6SJ96 375 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 RALGPS2Q86X27 583 aaPredicted RBP15.17■□□□□ 0.02
BRCC3-201ENST00000330045 CROCCP3Q8IVE0 287 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 CPNE9Q8IYJ1 553 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 DPP10Q8N608 796 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 ZNF420Q8TAQ5 688 aaPredicted RBP15.17■□□□□ 0.02
BRCC3-201ENST00000330045 BPIFB1Q8TDL5 484 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 POLR1BQ9H9Y6 1135 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 PLGRKTQ9HBL7 147 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 MAGEL2Q9UJ55 1249 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 FNDC3AQ9Y2H6 1198 aaKnown RBP15.17■□□□□ 0.02
BRCC3-201ENST00000330045 PCDHB3Q9Y5E6 796 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 PCDHGC4Q9Y5F7 938 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 GRXCR2A6NFK2 248 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 E5RI56 91 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 KDELR3O43731 214 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 ARL1P40616 181 aaPredicted RBP15.17■□□□□ 0.02
BRCC3-201ENST00000330045 TMED1Q13445 227 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 MRPL58Q14197 206 aaKnown RBP15.17■□□□□ 0.02
BRCC3-201ENST00000330045 PLCL1Q15111 1095 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 TGFBIQ15582 683 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 PYCR3Q53H96 274 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 GPR107Q5VW38 600 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 LETMD1Q6P1Q0 360 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 KLHL35Q6PF15 583 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 SFRP1Q8N474 314 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 LEMD2Q8NC56 503 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 BPIFA1Q9NP55 256 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 SARS2Q9NP81 518 aaKnown RBP15.17■□□□□ 0.02
BRCC3-201ENST00000330045 CDH7Q9ULB5 785 aa15.17■□□□□ 0.02
BRCC3-201ENST00000330045 MTMR11A4FU01 709 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 ATE1O95260 518 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 CDH1P12830 882 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 ENTPD1P49961 510 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 CLCN4P51793 760 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 CDH4P55283 916 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 OTUD3Q5T2D3 398 aaPredicted RBP15.16■□□□□ 0.02
BRCC3-201ENST00000330045 DLEU7Q6UYE1 221 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 KCTD8Q6ZWB6 473 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 RIMKLAQ8IXN7 391 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 DBF4BQ8NFT6 615 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 METTL6Q8TCB7 284 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 KCNJ9Q92806 393 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 HSPBAP1Q96EW2 488 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 SCLYQ96I15 445 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 SPATA17Q96L03 361 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 PPM1MQ96MI6 270 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 TSEN34Q9BSV6 310 aaKnown RBP15.16■□□□□ 0.02
BRCC3-201ENST00000330045 HEBP1Q9NRV9 189 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 AGO1Q9UL18 857 aaKnown RBP15.16■□□□□ 0.02
BRCC3-201ENST00000330045 H0YAE9 185 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 H3BMQ9 156 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 PQBP1O60828 265 aaKnown RBP15.16■□□□□ 0.02
BRCC3-201ENST00000330045 ALBP02768 609 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 ZDHHC11BP0C7U3 371 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 DCKP27707 260 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 RPS24P62847 133 aaKnown RBP15.16■□□□□ 0.02
BRCC3-201ENST00000330045 CCNYL2Q5T2Q4 361 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 IL27RAQ6UWB1 636 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 PRR23BQ6ZRT6 265 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 LRRC8DQ7L1W4 858 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms