RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 BEST1O76090 585 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 PARNO95453 639 aaKnown RBP12.64□□□□□ -0.39
CCDC60-201ENST00000327554 EDNRBP24530 442 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 HMGCS2P54868 508 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 IL5RAQ01344 420 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 FADDQ13158 208 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 OR4D1Q15615 310 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 ZNF404Q494X3 552 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 NOMO2Q5JPE7 1267 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 ATAD3CQ5T2N8 411 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 CCDC103Q8IW40 242 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 DPP10Q8N608 796 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 FBXO30Q8TB52 745 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 RHNO1Q9BSD3 238 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 UGT2B28Q9BY64 529 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 PRKD2Q9BZL6 878 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 DCSTAMPQ9H295 470 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 EPS8L2Q9H6S3 715 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 PLEKHA5Q9HAU0 1116 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 ZNF221Q9UK13 617 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 GJD2Q9UKL4 321 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 NEUROG3Q9Y4Z2 214 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 PDCD11Q14690 1871 aaKnown RBP12.64□□□□□ -0.39
CCDC60-201ENST00000327554 FAM234BA2RU67 622 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 PMPCBO75439 489 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 C22orf31O95567 290 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 CHRNA5P30532 468 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 DCTP40126 519 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 FCGRTP55899 365 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 TRIP4Q15650 581 aaPredicted RBP12.63□□□□□ -0.39
CCDC60-201ENST00000327554 PFKFB4Q16877 469 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 SIGIRRQ6IA17 410 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 PNCKQ6P2M8 343 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 RANBP10Q6VN20 620 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 FKBP9P1Q75LS8 142 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 KDELC2Q7Z4H8 507 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 NECAB2Q7Z6G3 386 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 LDB1Q86U70 411 aaPredicted RBP12.63□□□□□ -0.39
CCDC60-201ENST00000327554 CILP2Q8IUL8 1156 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 C18orf25Q96B23 403 aaPredicted RBP12.63□□□□□ -0.39
CCDC60-201ENST00000327554 ACOT13Q9NPJ3 140 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 CCDC177Q9NQR7 707 aaPredicted RBP12.63□□□□□ -0.39
CCDC60-201ENST00000327554 ITM2CQ9NQX7 267 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 PCDHB14Q9Y5E9 798 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 NYNRINQ9P2P1 1898 aaKnown RBP12.63□□□□□ -0.39
CCDC60-201ENST00000327554 CLDN24A6NM45 220 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 EFCAB9A8MZ26 197 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 FADS2O95864 444 aaKnown RBP12.63□□□□□ -0.39
CCDC60-201ENST00000327554 FTH1P02794 183 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 CYP11A1P05108 521 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 GGT5P36269 586 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 GEMP55040 296 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 XKR7Q5GH72 579 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 ZC3H12BQ5HYM0 836 aaKnown RBP12.63□□□□□ -0.39
CCDC60-201ENST00000327554 RFPL4BQ6ZWI9 263 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 ZFAND4Q86XD8 727 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 NLGN4XQ8N0W4 816 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 LRRC52Q8N7C0 313 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 PROKR1Q8TCW9 393 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 FIG4Q92562 907 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 PYCR2Q96C36 320 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 MRGPRX2Q96LB1 330 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 ZNF583Q96ND8 569 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 CCDC115Q96NT0 180 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 GORASP2Q9H8Y8 452 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 ENTPD7Q9NQZ7 604 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 FBXL12Q9NXK8 326 aa12.63□□□□□ -0.39
CCDC60-201ENST00000327554 SOWAHBA6NEL2 793 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 TBKBP1A7MCY6 615 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 HAT1O14929 419 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 S1PR4O95977 384 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 TGFB3P10600 412 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 ITGAMP11215 1152 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 HOXD8P13378 290 aaPredicted RBP12.62□□□□□ -0.39
CCDC60-201ENST00000327554 CD36P16671 472 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 GRIK1P39086 918 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 KRT6CP48668 564 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 LCP2Q13094 533 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 CDK10Q15131 360 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 RAB44Q7Z6P3 723 aaPredicted RBP12.62□□□□□ -0.39
CCDC60-201ENST00000327554 GALNT7Q86SF2 657 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 RYBPQ8N488 228 aaPredicted RBP12.62□□□□□ -0.39
CCDC60-201ENST00000327554 OR2T11Q8NH01 316 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 OR5K1Q8NHB7 308 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 RHBDF1Q96CC6 855 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 SLC47A1Q96FL8 570 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 DUSP16Q9BY84 665 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 ZBTB20Q9HC78 741 aaPredicted RBP12.62□□□□□ -0.39
CCDC60-201ENST00000327554 NPAP1Q9NZP6 1156 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 ZIM2Q9NZV7 527 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 TPRKBQ9Y3C4 175 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 COL1A2P08123 1366 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 GRXCR2A6NFK2 248 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 H0Y626 953 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 CLDN5O00501 218 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 GNGT2O14610 69 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 SSX4O60224 188 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 TSPAN1O60635 241 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 MFN2O95140 757 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 TRIM16O95361 564 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms