RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 GSTO2Q9H4Y5 243 aa15.39■□□□□ 0.05
SHROOM1-201ENST00000319854 EML4Q9HC35 981 aaKnown RBP15.39■□□□□ 0.05
SHROOM1-201ENST00000319854 ITGB1BP2Q9UKP3 347 aa15.39■□□□□ 0.05
SHROOM1-201ENST00000319854 IKZF3Q9UKT9 509 aa15.39■□□□□ 0.05
SHROOM1-201ENST00000319854 AGO1Q9UL18 857 aaKnown RBP15.39■□□□□ 0.05
SHROOM1-201ENST00000319854 FCF1Q9Y324 198 aaKnown RBP15.39■□□□□ 0.05
SHROOM1-201ENST00000319854 CPQQ9Y646 472 aa15.39■□□□□ 0.05
SHROOM1-201ENST00000319854 COMMD10Q9Y6G5 202 aa15.39■□□□□ 0.05
SHROOM1-201ENST00000319854 ZNF840PA6NDX5 716 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 ACOX3O15254 700 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 NIPSNAP2O75323 286 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 C1RP00736 705 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 FGF1P05230 155 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 OPRL1P41146 370 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 AGTR2P50052 363 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 KCNJ8Q15842 424 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 PIWIL3Q7Z3Z3 882 aaKnown RBP15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 NAT16Q8N8M0 369 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 GPR21Q99679 349 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 SLC30A3Q99726 388 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 TDRD1Q9BXT4 1180 aaKnown RBP15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 ARMC1Q9NVT9 282 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 DAPK2Q9UIK4 370 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 SLC30A1Q9Y6M5 507 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 SLCO1B7G3V0H7 640 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 K7ERQ8 282 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 MRASO14807 208 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 NPHS1O60500 1241 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 CRCPO75575 148 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 MZF1P28698 734 aaPredicted RBP15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 CASP2P42575 452 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 YBEYP58557 167 aaPredicted RBP15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 OXA1LQ15070 435 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 UNC50Q53HI1 259 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 SNX19Q92543 992 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 HPS1Q92902 700 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 ALPK1Q96QP1 1244 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 ABCG8Q9H221 673 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 FANCEQ9HB96 536 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 CCM2LQ9NUG4 571 aaPredicted RBP15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 IL37Q9NZH6 218 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 SEPT3Q9UH03 358 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 RNF112Q9ULX5 631 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 PCDHB9Q9Y5E1 797 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 FAM92AA1XBS5 289 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 H0Y626 953 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 PRRG1O14668 218 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 EI24O14681 340 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 CLASP2O75122 1294 aaKnown RBP15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 ESRRBO95718 433 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 NDST3O95803 873 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 BCL10O95999 233 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 IGLV3-27P01718 113 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 HLA-DPA1P20036 260 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 CHRM3P20309 590 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 JAK1P23458 1154 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 TIAL1Q01085 375 aaKnown RBP eCLIP15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 STX5Q13190 355 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 DEFB115Q30KQ5 88 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 ZNF678Q5SXM1 525 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 DEPDC1Q5TB30 811 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 PSAPL1Q6NUJ1 521 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 SIDT2Q8NBJ9 832 aaKnown RBP15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 OR13F1Q8NGS4 319 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 FEM1CQ96JP0 617 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 SIAEQ9HAT2 523 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 CROTQ9UKG9 612 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 POU2F3Q9UKI9 436 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 RAI2Q9Y5P3 530 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 DGKBQ9Y6T7 804 aa15.38■□□□□ 0.05
SHROOM1-201ENST00000319854 NPEPPSL1A6NEC2 478 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 BTN3A1O00481 513 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 STC2O76061 302 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 CD1DP15813 335 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 ZNF37AP17032 561 aaPredicted RBP15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 ELK4P28324 431 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 IFITM3Q01628 133 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 GRSF1Q12849 480 aaKnown RBP eCLIP15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 BFSP2Q13515 415 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 INTS11Q5TA45 600 aaKnown RBP15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 FAM45BPQ6NSW5 357 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 FAM45AQ8TCE6 357 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 AGPAT4Q9NRZ5 378 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 NR5A2O00482 541 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 INSIG1O15503 277 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 CLPXO76031 633 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 PRAMEF12O95522 483 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 SNAP29O95721 258 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 ALPIP09923 528 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 PRDX3P30048 256 aaKnown RBP15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 MAPKAPK2P49137 400 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 CYBRD1Q53TN4 286 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 RETREG3Q86VR2 466 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 TMCO5AQ8N6Q1 288 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 TUBGCP3Q96CW5 907 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 VN1R3Q9BXE9 311 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 PALMDQ9NP74 551 aa15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 DNMT3BQ9UBC3 853 aaKnown RBP15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 ZFC3H1O60293 1989 aaKnown RBP15.37■□□□□ 0.05
SHROOM1-201ENST00000319854 H7C4K7 107 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms