RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 MLLT6P55198 1093 aaPredicted RBP12.53□□□□□ -0.4
RETREG3-201ENST00000309428 VBP1P61758 197 aa12.53□□□□□ -0.4
RETREG3-201ENST00000309428 TNK2Q07912 1038 aa12.53□□□□□ -0.4
RETREG3-201ENST00000309428 ZNF177Q13360 481 aaPredicted RBP12.53□□□□□ -0.4
RETREG3-201ENST00000309428 GRB7Q14451 532 aa12.53□□□□□ -0.4
RETREG3-201ENST00000309428 MAPRE1Q15691 268 aaKnown RBP12.53□□□□□ -0.4
RETREG3-201ENST00000309428 AP5B1Q2VPB7 878 aa12.53□□□□□ -0.4
RETREG3-201ENST00000309428 RTP2Q5QGT7 225 aa12.53□□□□□ -0.4
RETREG3-201ENST00000309428 TIFABQ6ZNK6 161 aa12.53□□□□□ -0.4
RETREG3-201ENST00000309428 ANKRD46Q86W74 232 aa12.53□□□□□ -0.4
RETREG3-201ENST00000309428 SNX19Q92543 992 aa12.53□□□□□ -0.4
RETREG3-201ENST00000309428 INVSQ9Y283 1065 aa12.53□□□□□ -0.4
RETREG3-201ENST00000309428 GMEB1Q9Y692 573 aa12.53□□□□□ -0.4
RETREG3-201ENST00000309428 G3V2T6 193 aa12.52□□□□□ -0.4
RETREG3-201ENST00000309428 H3BMQ9 156 aa12.52□□□□□ -0.4
RETREG3-201ENST00000309428 PORP16435 677 aaPredicted RBP12.52□□□□□ -0.4
RETREG3-201ENST00000309428 ZNF12P17014 697 aa12.52□□□□□ -0.4
RETREG3-201ENST00000309428 CD247P20963 164 aa12.52□□□□□ -0.4
RETREG3-201ENST00000309428 APLP1P51693 650 aa12.52□□□□□ -0.4
RETREG3-201ENST00000309428 TRAF3Q13114 568 aa12.52□□□□□ -0.4
RETREG3-201ENST00000309428 CDH18Q13634 790 aa12.52□□□□□ -0.4
RETREG3-201ENST00000309428 TSTD2Q5T7W7 516 aa12.52□□□□□ -0.4
RETREG3-201ENST00000309428 TIGD7Q6NT04 549 aaPredicted RBP12.52□□□□□ -0.4
RETREG3-201ENST00000309428 R3HCC1LQ7Z5L2 792 aaKnown RBP12.52□□□□□ -0.4
RETREG3-201ENST00000309428 THAP5Q7Z6K1 395 aa12.52□□□□□ -0.4
RETREG3-201ENST00000309428 MON1AQ86VX9 555 aa12.52□□□□□ -0.4
RETREG3-201ENST00000309428 HS3ST5Q8IZT8 346 aa12.52□□□□□ -0.4
RETREG3-201ENST00000309428 EID3Q8N140 333 aa12.52□□□□□ -0.4
RETREG3-201ENST00000309428 CLIP4Q8N3C7 705 aa12.52□□□□□ -0.4
RETREG3-201ENST00000309428 ZNF366Q8N895 744 aa12.52□□□□□ -0.4
RETREG3-201ENST00000309428 PNPT1Q8TCS8 783 aaKnown RBP12.52□□□□□ -0.4
RETREG3-201ENST00000309428 HM13Q8TCT9 377 aa12.52□□□□□ -0.4
RETREG3-201ENST00000309428 COG8Q96MW5 612 aa12.52□□□□□ -0.4
RETREG3-201ENST00000309428 POLR1EQ9GZS1 481 aaKnown RBP12.52□□□□□ -0.4
RETREG3-201ENST00000309428 TLR8Q9NR97 1041 aaKnown RBP12.52□□□□□ -0.4
RETREG3-201ENST00000309428 GALPQ9UBC7 116 aa12.52□□□□□ -0.4
RETREG3-201ENST00000309428 TEKT2Q9UIF3 430 aa12.52□□□□□ -0.4
RETREG3-201ENST00000309428 TRMT6Q9UJA5 497 aaKnown RBP12.52□□□□□ -0.4
RETREG3-201ENST00000309428 ZNF638Q14966 1978 aaKnown RBP12.52□□□□□ -0.4
RETREG3-201ENST00000309428 DGKEP52429 567 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 SULT2A1Q06520 285 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 CD300CQ08708 224 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 ZNF846Q147U1 533 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 AHSA2Q719I0 299 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 ERMP1Q7Z2K6 904 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 GPR180Q86V85 440 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 SLC22A16Q86VW1 577 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 HS6ST3Q8IZP7 471 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 CPSF7Q8N684 471 aaKnown RBP12.52□□□□□ -0.41
RETREG3-201ENST00000309428 ASIC4Q96FT7 647 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 C3orf30Q96M34 536 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 DEPDC7Q96QD5 511 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 VAT1Q99536 393 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 CATSPERZQ9NTU4 200 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 VPS4AQ9UN37 437 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 ASCC3Q8N3C0 2202 aaKnown RBP12.52□□□□□ -0.41
RETREG3-201ENST00000309428 MANSC4A6NHS7 340 aaPredicted RBP12.52□□□□□ -0.41
RETREG3-201ENST00000309428 ALDH1A2O94788 518 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 PGLSO95336 258 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 ANK1P16157 1881 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 CCNCP24863 283 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 CASP9P55211 416 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 RHOAP61586 193 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 RPL38P63173 70 aaKnown RBP12.52□□□□□ -0.41
RETREG3-201ENST00000309428 TUBB3Q13509 450 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 CLLU1OSQ5K130 101 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 COLEC12Q5KU26 742 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 CCNYL2Q5T2Q4 361 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 ARMC4Q5T2S8 1044 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 STEAP4Q687X5 459 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 RASAL3Q86YV0 1011 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 CMTR2Q8IYT2 770 aaKnown RBP12.52□□□□□ -0.41
RETREG3-201ENST00000309428 OR10A6Q8NH74 314 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 FAR1Q8WVX9 515 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 NTAN1Q96AB6 310 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 ADGRE2Q9UHX3 823 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 EIF2B4Q9UI10 523 aaKnown RBP12.52□□□□□ -0.41
RETREG3-201ENST00000309428 CD84Q9UIB8 345 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 USP22Q9UPT9 525 aa12.52□□□□□ -0.41
RETREG3-201ENST00000309428 HHLA1C9JL84 531 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 KPNA6O60684 536 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 CLASP2O75122 1294 aaKnown RBP12.51□□□□□ -0.41
RETREG3-201ENST00000309428 ARNTP27540 789 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 AKT1P31749 480 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 HOXD12P35452 270 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 DEFA1P59665 94 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 DEFA3P59666 94 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 CLCQ05315 142 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 RAD51Q06609 339 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 NFE2Q16621 373 aaPredicted RBP12.51□□□□□ -0.41
RETREG3-201ENST00000309428 MORN1Q5T089 497 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 TTC23Q5W5X9 447 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 ZNF467Q7Z7K2 595 aaPredicted RBP12.51□□□□□ -0.41
RETREG3-201ENST00000309428 Q8N9G6 341 aaPredicted RBP12.51□□□□□ -0.41
RETREG3-201ENST00000309428 TERB1Q8NA31 727 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 SPPL2BQ8TCT7 592 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 OTULINQ96BN8 352 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 NODALQ96S42 347 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 TSEN34Q9BSV6 310 aaKnown RBP12.51□□□□□ -0.41
RETREG3-201ENST00000309428 IMPAD1Q9NX62 359 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms