RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ITPKAP23677 461 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 CPOXP36551 454 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 KIR3DL1P43629 444 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 XKR6Q5GH73 641 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 TECRLQ5HYJ1 363 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 DGKKQ5KSL6 1271 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 KBTBD8Q8NFY9 601 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 PRICKLE1Q96MT3 831 aaPredicted RBP13.13□□□□□ -0.31
DDX54-201ENST00000306014 VPS35Q96QK1 796 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 ZC4H2Q9NQZ6 224 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 OGDHLQ9ULD0 1010 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 COL2A1P02458 1487 aaPredicted RBP13.13□□□□□ -0.31
DDX54-201ENST00000306014 SNPHO15079 494 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 NBNO60934 754 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 UGT2B11O75310 529 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 C1RP00736 705 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 MLLT6P55198 1093 aaPredicted RBP13.13□□□□□ -0.31
DDX54-201ENST00000306014 HMGCS1Q01581 520 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 PFKPQ01813 784 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 TRIM32Q13049 653 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 CYP20A1Q6UW02 462 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 GPRIN1Q7Z2K8 1008 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 TRMT11Q7Z4G4 463 aaKnown RBP13.13□□□□□ -0.31
DDX54-201ENST00000306014 KDM1BQ8NB78 822 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 C19orf18Q8NEA5 215 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 BRI3BPQ8WY22 251 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 TMIGD2Q96BF3 282 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 BIRC7Q96CA5 298 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 KLHL32Q96NJ5 620 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 NSUN5Q96P11 429 aaKnown RBP13.13□□□□□ -0.31
DDX54-201ENST00000306014 NUDT4Q9NZJ9 180 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 DNAJB9Q9UBS3 223 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 MYH9P35579 1960 aaKnown RBP13.13□□□□□ -0.31
DDX54-201ENST00000306014 TAF4O00268 1085 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 INSIG1O15503 277 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 SUV39H1O43463 412 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 SCELO95171 688 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 ALOX5P09917 674 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 IL7RP16871 459 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 DNAJB1P25685 340 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 IL12AP29459 219 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 SMAD3P84022 425 aaKnown RBP13.13□□□□□ -0.31
DDX54-201ENST00000306014 GRB7Q14451 532 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 MSANTD2Q6P1R3 559 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 FAM43BQ6ZT52 329 aaPredicted RBP13.13□□□□□ -0.31
DDX54-201ENST00000306014 RSPH1Q8WYR4 309 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 FEM1CQ96JP0 617 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 COPS8Q99627 209 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 CGREF1Q99674 301 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 ZFYVE1Q9HBF4 777 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 TRMT13Q9NUP7 481 aaKnown RBP13.13□□□□□ -0.31
DDX54-201ENST00000306014 EXD2Q9NVH0 621 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 ZDHHC7Q9NXF8 308 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 PTBP2Q9UKA9 531 aaKnown RBP13.13□□□□□ -0.31
DDX54-201ENST00000306014 IQCF5A8MTL0 148 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 KERAO60938 352 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 PRAMEF1O95521 474 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 SNAP29O95721 258 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 SERPINA1P01009 418 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 CDH1P12830 882 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 CDC42P60953 191 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 LAPTM5Q13571 262 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 FBXL22Q6P050 247 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 PIK3C3Q8NEB9 887 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 KBTBD7Q8WVZ9 684 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 ZDHHC6Q9H6R6 413 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 ITGB1BP2Q9UKP3 347 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 KLHL20Q9Y2M5 609 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 MAST2Q6P0Q8 1798 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 LRRC14BA6NHZ5 514 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 MYL12BO14950 172 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 CLDN11O75508 207 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 EFNA1P20827 205 aaPredicted RBP13.12□□□□□ -0.31
DDX54-201ENST00000306014 SPIBQ01892 262 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 GK3PQ14409 553 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 FBXL19Q6PCT2 694 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 ANKS3Q6ZW76 656 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 USP45Q70EL2 814 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 ZNF534Q76KX8 674 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 GRIN3AQ8TCU5 1115 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 MTMR10Q9NXD2 777 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 UNCXA6NJT0 531 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 HOXA2O43364 376 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 TSC22D2O75157 780 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 PRKD3O94806 890 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 ACVRL1P37023 503 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 RXRGP48443 463 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 CDKL1Q00532 357 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 UBE2R2Q712K3 238 aaPredicted RBP13.12□□□□□ -0.31
DDX54-201ENST00000306014 ZDHHC21Q8IVQ6 265 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 ACVR1CQ8NER5 493 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 DEPDC7Q96QD5 511 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 OLFM1Q99784 485 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 SLC29A1Q99808 456 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 C16orf70Q9BSU1 422 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 ZFP37Q9Y6Q3 630 aaPredicted RBP13.12□□□□□ -0.31
DDX54-201ENST00000306014 ARAP2Q8WZ64 1704 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 SNTNA6NMZ2 147 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 SOCS2O14508 198 aa13.12□□□□□ -0.31
DDX54-201ENST00000306014 FKTNO75072 461 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms