RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 OR2AG2A6NM03 316 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 LMO7DNF2Z398 122 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 TPP1O14773 563 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 AQP9O43315 295 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 FTH1P02794 183 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 GIMD1P0DJR0 217 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 PKMP14618 531 aaKnown RBP13.88□□□□□ -0.19
VPS25-201ENST00000253794 DGKAP23743 735 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 CTBSQ01459 385 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 ILF3Q12906 894 aaKnown RBP eCLIP13.88□□□□□ -0.19
VPS25-201ENST00000253794 BRD3Q15059 726 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 SMAD1Q15797 465 aaKnown RBP13.88□□□□□ -0.19
VPS25-201ENST00000253794 UAP1Q16222 522 aaPredicted RBP13.88□□□□□ -0.19
VPS25-201ENST00000253794 KLHL38Q2WGJ6 581 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 MAP9Q49MG5 647 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 ZNF542PQ5EBM4 170 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 PRAMEF14Q5SWL7 426 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 ZNF549Q6P9A3 640 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 CNSTQ6PJW8 725 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 LVRNQ6Q4G3 990 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 AMZ2Q86W34 360 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 CNPY4Q8N129 248 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 SLC25A45Q8N413 288 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 DCLK2Q8N568 766 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 OR2L2Q8NH16 312 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 HM13Q8TCT9 377 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 KCNJ9Q92806 393 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 CCM2Q9BSQ5 444 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 EDEM2Q9BV94 578 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 TSSK1BQ9BXA7 367 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 GSDMCQ9BYG8 508 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 RHOJQ9H4E5 214 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 KLHL42Q9P2K6 505 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 SLC17A6Q9P2U8 582 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 SLC23A2Q9UGH3 650 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 MOSPD1Q9UJG1 213 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 PCOLCE2Q9UKZ9 415 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 MED16Q9Y2X0 877 aa13.88□□□□□ -0.19
VPS25-201ENST00000253794 TMEM131Q92545 1883 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 UBA6A0AVT1 1052 aaPredicted RBP13.87□□□□□ -0.19
VPS25-201ENST00000253794 A6NCN8 305 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 SCAMP1O15126 338 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 POP7O75817 140 aaKnown RBP13.87□□□□□ -0.19
VPS25-201ENST00000253794 VCLP18206 1134 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 GP5P40197 560 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 LIMK1P53667 647 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 ATXN3P54252 364 aaPredicted RBP13.87□□□□□ -0.19
VPS25-201ENST00000253794 EIF3BP55884 814 aaKnown RBP13.87□□□□□ -0.19
VPS25-201ENST00000253794 ARHGAP8P85298 464 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 SLC29A2Q14542 456 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 GBX1Q14549 363 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 PRRT3Q5FWE3 981 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 CRTC3Q6UUV7 619 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 WASH2PQ6VEQ5 465 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 DET1Q7L5Y6 550 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 RD3Q7Z3Z2 195 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 STRA8Q7Z7C7 330 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 ZC3HC1Q86WB0 502 aaKnown RBP13.87□□□□□ -0.19
VPS25-201ENST00000253794 HNRNPLLQ8WVV9 542 aaKnown RBP13.87□□□□□ -0.19
VPS25-201ENST00000253794 SLC44A1Q8WWI5 657 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 PANX3Q96QZ0 392 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 RBBP8Q99708 897 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 AARSD1Q9BTE6 412 aaKnown RBP13.87□□□□□ -0.19
VPS25-201ENST00000253794 DHRS4Q9BTZ2 278 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 GTPBP2Q9BX10 602 aaKnown RBP13.87□□□□□ -0.19
VPS25-201ENST00000253794 TMEM9BQ9NQ34 198 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 WASH6PQ9NQA3 447 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 TM7SF3Q9NS93 570 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 CRYL1Q9Y2S2 319 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 PRKAB1Q9Y478 270 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 GPSM3Q9Y4H4 160 aa13.87□□□□□ -0.19
VPS25-201ENST00000253794 FAM186AA6NE01 2351 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 NEMP2A6NFY4 417 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 LIN7AO14910 233 aaPredicted RBP13.86□□□□□ -0.19
VPS25-201ENST00000253794 NUDT17P0C025 328 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 ACP5P13686 325 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 CTSEP14091 401 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 FMO4P31512 558 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 HSD17B3P37058 310 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 LIMK2P53671 638 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 TIAL1Q01085 375 aaKnown RBP eCLIP13.86□□□□□ -0.192e-11■■■■■ 40
VPS25-201ENST00000253794 PLOD1Q02809 727 aaPredicted RBP13.86□□□□□ -0.19
VPS25-201ENST00000253794 BNIP3Q12983 259 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 RPA4Q13156 261 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 INSCQ1MX18 579 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 GRTP1Q5TC63 336 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 AGAP9Q5VTM2 703 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 METRNLQ641Q3 311 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 PTRHD1Q6GMV3 140 aaKnown RBP13.86□□□□□ -0.19
VPS25-201ENST00000253794 CHST15Q7LFX5 561 aaPredicted RBP13.86□□□□□ -0.19
VPS25-201ENST00000253794 GKN2Q86XP6 184 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 BEND7Q8N7W2 519 aaPredicted RBP13.86□□□□□ -0.19
VPS25-201ENST00000253794 OR2I1PQ8NGU4 316 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 CCL4L1Q8NHW4 92 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 LKAAEAR1Q8TD35 194 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 LMX1AQ8TE12 382 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 NAT14Q8WUY8 206 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 CAAP1Q9H8G2 361 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 PPCSQ9HAB8 311 aa13.86□□□□□ -0.19
VPS25-201ENST00000253794 RXFP3Q9NSD7 469 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms