RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 AP1S3Q96PC3 154 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 NOL11Q9H8H0 719 aaKnown RBP13.09□□□□□ -0.31
NEK9-201ENST00000238616 AGO3Q9H9G7 860 aaKnown RBP13.09□□□□□ -0.31
NEK9-201ENST00000238616 DICER1Q9UPY3 1922 aaKnown RBP13.09□□□□□ -0.31
NEK9-201ENST00000238616 TSPAN4O14817 238 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 ZNF135P52742 658 aaPredicted RBP13.09□□□□□ -0.31
NEK9-201ENST00000238616 RANBP3LQ86VV4 465 aaPredicted RBP13.09□□□□□ -0.31
NEK9-201ENST00000238616 UNC5BQ8IZJ1 945 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 FSTL5Q8N475 847 aaPredicted RBP13.09□□□□□ -0.31
NEK9-201ENST00000238616 SLC6A15Q9H2J7 730 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 C9J4A7 227 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 TRAFD1O14545 582 aaPredicted RBP13.09□□□□□ -0.31
NEK9-201ENST00000238616 SSX5O60225 188 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 KRT36O76013 467 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 SLITRK3O94933 977 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 ITGA5P08648 1049 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 SPTBP11277 2137 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 SDC2P34741 201 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 OR3A3P47888 321 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 OR3A2P47893 321 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 RPP38P78345 283 aaKnown RBP13.09□□□□□ -0.31
NEK9-201ENST00000238616 GPC2Q8N158 579 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 ACP6Q9NPH0 428 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 KCNQ5Q9NR82 932 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 UCKL1Q9NWZ5 548 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 ZDHHC9Q9Y397 364 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 ASGR1P07306 291 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 AP3S2P59780 193 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 CCINQ13939 588 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 RRP1BQ14684 758 aaKnown RBP13.09□□□□□ -0.31
NEK9-201ENST00000238616 TSGA10IPQ3SY00 556 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 CIR1Q86X95 450 aaPredicted RBP13.09□□□□□ -0.31
NEK9-201ENST00000238616 PNLDC1Q8NA58 520 aaKnown RBP13.09□□□□□ -0.31
NEK9-201ENST00000238616 ETNPPLQ8TBG4 499 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 VNN3Q9NY84 501 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 TPRP12270 2363 aaKnown RBP13.09□□□□□ -0.31
NEK9-201ENST00000238616 DDX3YO15523 660 aaKnown RBP13.09□□□□□ -0.31
NEK9-201ENST00000238616 ADRA1DP25100 572 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 TXNDC11Q6PKC3 985 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 PIWIL2Q8TC59 973 aaKnown RBP13.09□□□□□ -0.31
NEK9-201ENST00000238616 GPR151Q8TDV0 419 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 THRSPQ92748 146 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 DLG3Q92796 817 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 RFT1Q96AA3 541 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 NCDNQ9UBB6 729 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 FCER2P06734 321 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 COX4I1P13073 169 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 TNFSF9P41273 254 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 C1QTNF8P60827 252 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 ODF4Q2M2E3 257 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 CKAP2Q8WWK9 683 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 GMIPQ9P107 970 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 CNTNAP1P78357 1384 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 GLYATL1P3A0A0U1RQE8 302 aa13.08□□□□□ -0.31
NEK9-201ENST00000238616 IRGMA1A4Y4 181 aa13.08□□□□□ -0.31
NEK9-201ENST00000238616 NUAK1O60285 661 aa13.08□□□□□ -0.31
NEK9-201ENST00000238616 PCDHGA12O60330 932 aa13.08□□□□□ -0.31
NEK9-201ENST00000238616 PLA2G16P53816 162 aa13.08□□□□□ -0.31
NEK9-201ENST00000238616 SEMG2Q02383 582 aa13.08□□□□□ -0.31
NEK9-201ENST00000238616 CXCL9Q07325 125 aa13.08□□□□□ -0.31
NEK9-201ENST00000238616 DCST1Q5T197 706 aa13.08□□□□□ -0.31
NEK9-201ENST00000238616 BICRALQ6AI39 1079 aa13.08□□□□□ -0.31
NEK9-201ENST00000238616 FIP1L1Q6UN15 594 aaKnown RBP13.08□□□□□ -0.31
NEK9-201ENST00000238616 USP50Q70EL3 339 aaPredicted RBP13.08□□□□□ -0.31
NEK9-201ENST00000238616 DISP1Q96F81 1524 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 ZNF878C9JN71 531 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 PSMA1P25786 263 aaKnown RBP13.08□□□□□ -0.32
NEK9-201ENST00000238616 MAMLD1Q13495 774 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 CCDC80Q76M96 950 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 SLCO6A1Q86UG4 719 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 VCPIP1Q96JH7 1222 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 CHCHD6Q9BRQ6 235 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 TRMT61BQ9BVS5 477 aaKnown RBP13.08□□□□□ -0.32
NEK9-201ENST00000238616 NINJ2Q9NZG7 142 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 HBS1LQ9Y450 684 aaKnown RBP13.08□□□□□ -0.32
NEK9-201ENST00000238616 ZMYM2Q9UBW7 1377 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 CLEC3AO75596 197 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 THRBP10828 461 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 FBXO22Q8NEZ5 403 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 PPP1R14BQ96C90 147 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 DIRAS2Q96HU8 199 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 RPL10LQ96L21 214 aaKnown RBP13.08□□□□□ -0.32
NEK9-201ENST00000238616 HBEGFQ99075 208 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 WDR77Q9BQA1 342 aaPredicted RBP13.08□□□□□ -0.32
NEK9-201ENST00000238616 KCNK4Q9NYG8 393 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 NR2E1Q9Y466 385 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 CHRM5P08912 532 aaPredicted RBP13.08□□□□□ -0.32
NEK9-201ENST00000238616 CCR10P46092 362 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 SMARCB1Q12824 385 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 DGKZQ13574 1117 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 DLG2Q15700 870 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 SCGB2B2Q4G0G5 96 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 SLC9A4Q6AI14 798 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 DCLRE1AQ6PJP8 1040 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 RBM44Q6ZP01 1051 aaKnown RBP13.08□□□□□ -0.32
NEK9-201ENST00000238616 OR4K2Q8NGD2 314 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 OR5T2Q8NGG2 359 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 MRPS30Q9NP92 439 aaKnown RBP13.08□□□□□ -0.32
NEK9-201ENST00000238616 C2orf71A6NGG8 1288 aa13.08□□□□□ -0.32
NEK9-201ENST00000238616 M0R036 132 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms