RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Racgap1Q9WVM1 628 aa11.76□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Gm11983V9GXS8 105 aa11.76□□□□□ -0.53
Pcif1-201ENSMUST00000041643 PpigA2AR02 752 aaKnown RBP11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Vmn2r116E9Q6I0 856 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Vmn2r112L7N221 857 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Cyp2a4P15392 494 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Cyp2a5P20852 494 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Oprl1P35377 367 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Usp46P62069 366 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Meaf6Q2VPQ9 191 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Pdp2Q504M2 532 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Cd6Q61003 665 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Slc6a3Q61327 619 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Ift52Q62559 426 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 S100a15aQ6S5I3 108 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 FicdQ8BIX9 458 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Casp9Q8C3Q9 454 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Slc15a4Q91W98 574 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Rnf186Q9D241 226 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Ccr10Q9JL21 362 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Net1Q9Z206 595 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Fibcd1A2AV25 459 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Wdr95D3Z7A8 784 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Vmn2r94E9PZK8 818 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Zfp277E9Q6D6 583 aaKnown RBP11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Gm597E9Q8J5 896 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Cfhr2Q4LDF6 332 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Ubap1Q8BH48 502 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Ccdc32Q8BS39 179 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Cldn19Q9ET38 224 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Smpd3Q9JJY3 655 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Itgb6Q9Z0T9 787 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 C4bP01029 1738 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Vmn1r3A2AMT7 306 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Trim15G3UY57 292 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 ClockO08785 855 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 H2-M9O19442 342 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Gnpda1O88958 289 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Irs1P35569 1233 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Q14AM7 275 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Runx1t1Q61909 577 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Abhd10Q6PE15 297 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 MogsQ80UM7 834 aaKnown RBP11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Pcdh20Q8BIZ0 952 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Fbxo38Q8BMI0 1194 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Vrk2Q8BN21 503 aaKnown RBP11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 ThtpaQ8JZL3 224 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Vmn1r79Q8R285 306 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Cryl1Q99KP3 319 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 EefsecQ9JHW4 583 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Znf536Q8K083 1302 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Zmynd12A2BGJ5 363 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Usp51B1AY15 661 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Atp6ap1lD3Z5W0 336 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Znf683I7HJS4 458 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Gm3159K7N760 267 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 C1dO35473 141 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Ifnar2O35664 513 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 RxrgP28705 463 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Capza2P47754 286 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Slc6a4Q60857 630 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 HrQ61645 1182 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Scn4bQ7M729 228 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Mul1Q8VCM5 352 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Olfr330Q8VGD9 315 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Tex46Q9CPU3 165 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Stk16O88697 305 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Hspa1bP17879 642 aaKnown RBP11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Hoxa2P31245 372 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 UcmaQ14BU0 138 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Myl12aQ6ZWQ9 172 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Snx32Q80ZJ7 404 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Cpsf7Q8BTV2 471 aaKnown RBP11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Gsdmc3Q8CB12 480 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Rbm12Q8R4X3 992 aaKnown RBP11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Mcm8Q9CWV1 833 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Nudt14Q9D142 222 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 NagaQ9QWR8 415 aa11.75□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Polr2jO08740 117 aaKnown RBP11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 LdlrP35951 862 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Shcbp1lQ3TTP0 639 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 StradaQ3UUJ4 431 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Olfr464Q5SW48 313 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Phc1Q64028 1012 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Orai3Q6P8G8 290 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Znf513Q6PD29 541 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Trim14Q8BVW3 440 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Snapc1Q8K0S9 389 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Acap1Q8K2H4 740 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 NeproQ8R2U2 564 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Guca1bQ8VBV8 201 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Olfr541Q8VGM0 312 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 AdprmQ99KS6 340 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Yipf2Q99LP8 312 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Spock2Q9ER58 423 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Extl1Q9JKV7 669 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 VapbQ9QY76 243 aaKnown RBP11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Epb41l1Q9Z2H5 879 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Gm7145A0A087WS64 360 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Grin3aA2AIR5 1135 aa11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms