RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Q80Y39 304 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Fignl1Q8BPY9 683 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Slc39a11Q8BWY7 342 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Apoa5Q8C7G5 368 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Ildr1Q8CBR1 537 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Olfr1484Q8VEU6 315 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Hbb-bh2B2RVB7 147 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 TagapB2RWW0 714 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 DdcO88533 480 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Chrm1P12657 460 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Slc2a3P32037 493 aaKnown RBP12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 WarsP32921 481 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Tnfsf4P43488 198 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Trit1Q80UN9 467 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Btnl9Q8BJE2 536 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Bloc1s5Q8R015 185 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Oas1hQ8VI97 369 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Nt5c1bQ91YE9 573 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Cmc1Q9CPZ8 106 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Mfsd2aQ9DA75 534 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Jph3Q9ET77 744 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Myg1Q9JK81 380 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Wnt8bQ9WUD6 350 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Magi3Q9EQJ9 1476 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Cyp4a30bA0A087WS15 508 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Gm6356L7N2A7 188 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Per3O70361 1113 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Gpd1P13707 349 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 LdlrP35951 862 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Btbd1P58544 488 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Rtkn2Q14B46 604 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Gm29609Q3UU56 907 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Slc30a1Q60738 503 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Tmem151bQ68FE7 561 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Znf592Q8BHZ4 1262 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Gtf3c2Q8BL74 907 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Syne4Q8CII8 388 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Zcchc9Q8R1J3 271 aaKnown RBP12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Slc3a1Q91WV7 685 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Gtf2e2Q9D902 292 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Actrt2Q9D9L5 377 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Mxra8Q9DBV4 442 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Tulp4Q9JIL5 1547 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Btbd35f16A0A087WSN2 498 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Rnpepl1G5E872 720 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Bhlhe40O35185 411 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Svs4P18419 113 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Ptpn22P29352 802 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Kcnj12P52187 427 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Agxt2Q3UEG6 513 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Slc22a16Q497L8 649 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Sez6lQ6P1D5 963 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 AtminQ6P9S1 818 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 N6amt1Q6SKR2 214 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Olfr699Q7TRN3 316 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Gulp1Q8K2A1 304 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Mark1Q8VHJ5 795 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Nudt8Q9CR24 210 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Dnajc18Q9CZJ9 357 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Q9D1F3 157 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Gabra4Q9D6F4 552 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 ItpaQ9D892 198 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Tfr2Q9JKX3 798 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Tinf2Q9QXG9 341 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Mapk9Q9WTU6 423 aa12.12□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Gm30302A0A1Y7VN40 1110 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Zfp952B0V2W4 504 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Gpr137cE9Q343 423 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 H2-ObO35424 271 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Rpl3P27659 403 aaKnown RBP12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Mmp20P57748 482 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Rps3aP97351 264 aaKnown RBP12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Eif1adQ3THJ3 170 aaKnown RBP12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Glp2rQ5IXF8 512 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 OgnQ62000 298 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Ddx51Q6P9R1 639 aaKnown RBP12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Phtf2Q8CB19 747 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Grm3Q9QYS2 879 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Cntnap4Q99P47 1310 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Gm6592A2AHC7 168 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Cntnap3E9PY62 1287 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Gtpbp1O08582 668 aaKnown RBP12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Pld3O35405 488 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 DctP29812 517 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Dtx3lQ3UIR3 748 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Coq8bQ566J8 533 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Aldh1a2Q62148 518 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Pcdha6Q91Y14 946 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Lhfpl3Q9CTN8 222 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Fam96bQ9D187 163 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Mfsd10Q9D2V8 456 aaKnown RBP12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Rps6ka4Q9Z2B9 773 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Spag17Q5S003 2320 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Slc6a21A0A1B0GSD2 748 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Zfp282E9PVC2 666 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Itga11P61622 1188 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Snrpd2P62317 118 aaKnown RBP12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Eml1Q05BC3 814 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Arf2Q8BSL7 181 aa12.11□□□□□ -0.47
Pcdhac1-201ENSMUST00000007584 Tprg1Q8CB49 279 aa12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 19.3 ms