RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 CENPIQ92674 756 aaPredicted RBP14.21□□□□□ -0.13
SCARB2-208ENST00000638372 AHCYL2Q96HN2 611 aaKnown RBP14.21□□□□□ -0.13
SCARB2-208ENST00000638372 HEPHQ9BQS7 1158 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 PCDHAC1Q9H158 963 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 VRTNQ9H8Y1 702 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 DAPK2Q9UIK4 370 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 FBXL21Q9UKT6 434 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 SH3GLB1Q9Y371 365 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 CAB39Q9Y376 341 aaPredicted RBP14.21□□□□□ -0.13
SCARB2-208ENST00000638372 KRT75O95678 551 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 DNTTP04053 509 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 CCDC159P0C7I6 412 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 RPL3P39023 403 aaKnown RBP14.21□□□□□ -0.13
SCARB2-208ENST00000638372 GATMP50440 423 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 C21orf59P57076 290 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 SPIBQ01892 262 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 SLC20A2Q08357 652 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 SIM2Q14190 667 aaPredicted RBP14.21□□□□□ -0.13
SCARB2-208ENST00000638372 ARMC4Q5T2S8 1044 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 TMC5Q6UXY8 1006 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 AGMOQ6ZNB7 445 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 RPS27LQ71UM5 84 aaKnown RBP14.21□□□□□ -0.13
SCARB2-208ENST00000638372 R3HCC1LQ7Z5L2 792 aaKnown RBP14.21□□□□□ -0.13
SCARB2-208ENST00000638372 ZNF366Q8N895 744 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 SH3RF2Q8TEC5 729 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 MCMBPQ9BTE3 642 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 STRA6Q9BX79 667 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 ZNF232Q9UNY5 417 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 A0A1W2PQ67 120 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 MTX2O75431 263 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.21□□□□□ -0.13
SCARB2-208ENST00000638372 TRIM25Q14258 630 aaKnown RBP14.21□□□□□ -0.13
SCARB2-208ENST00000638372 TCEAL1Q15170 157 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 ANGPT1Q15389 498 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 SLC5A9Q2M3M2 681 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 ARMCX4Q5H9R4 360 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 PARGQ86W56 976 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 HEATR4Q86WZ0 1026 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 CBR4Q8N4T8 237 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 ZFP28Q8NHY6 868 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 WDR36Q8NI36 951 aaKnown RBP14.21□□□□□ -0.13
SCARB2-208ENST00000638372 PALMDQ9NP74 551 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 DNAJB4Q9UDY4 337 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 MED26O95402 600 aa14.21□□□□□ -0.14
SCARB2-208ENST00000638372 IFNA16P05015 189 aa14.21□□□□□ -0.14
SCARB2-208ENST00000638372 PTPN2P17706 415 aa14.21□□□□□ -0.14
SCARB2-208ENST00000638372 CDC42P60953 191 aa14.21□□□□□ -0.14
SCARB2-208ENST00000638372 LPIN1Q14693 890 aa14.21□□□□□ -0.14
SCARB2-208ENST00000638372 SF1Q15637 639 aaKnown RBP14.21□□□□□ -0.14
SCARB2-208ENST00000638372 RNF220Q5VTB9 566 aa14.21□□□□□ -0.14
SCARB2-208ENST00000638372 C14orf80Q86SX3 495 aa14.21□□□□□ -0.14
SCARB2-208ENST00000638372 ARMC8Q8IUR7 673 aa14.21□□□□□ -0.14
SCARB2-208ENST00000638372 OR7A2PQ8NGA2 310 aa14.21□□□□□ -0.14
SCARB2-208ENST00000638372 SLC47A1Q96FL8 570 aa14.21□□□□□ -0.14
SCARB2-208ENST00000638372 ADAM7Q9H2U9 754 aa14.21□□□□□ -0.14
SCARB2-208ENST00000638372 CLK4Q9HAZ1 481 aaKnown RBP14.21□□□□□ -0.14
SCARB2-208ENST00000638372 USP29Q9HBJ7 922 aa14.21□□□□□ -0.14
SCARB2-208ENST00000638372 KLHL1Q9NR64 748 aa14.21□□□□□ -0.14
SCARB2-208ENST00000638372 DOT1LQ8TEK3 1739 aa14.21□□□□□ -0.14
SCARB2-208ENST00000638372 FAM25AB3EWG3 89 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 FAM25CB3EWG5 89 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 FAM25GB3EWG6 89 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 TRIM24O15164 1050 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 ANXA4P09525 319 aaPredicted RBP14.2□□□□□ -0.14
SCARB2-208ENST00000638372 BUD31P41223 144 aaPredicted RBP14.2□□□□□ -0.14
SCARB2-208ENST00000638372 NSG1P42857 185 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 B3GNT9Q6UX72 402 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 GALNT5Q7Z7M9 940 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 OR4A15Q8NGL6 344 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 C2orf15Q8WU43 125 aaKnown RBP14.2□□□□□ -0.14
SCARB2-208ENST00000638372 TMEM40Q8WWA1 233 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 EBPLQ9BY08 206 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 NDEL1Q9GZM8 345 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 SOHLH2Q9NX45 425 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 MYO18AQ92614 2054 aaKnown RBP14.2□□□□□ -0.14
SCARB2-208ENST00000638372 IGKV6-21A0A0C4DH24 114 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 A8MT66 165 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 CACNB4O00305 520 aaPredicted RBP14.2□□□□□ -0.14
SCARB2-208ENST00000638372 ALOX12P18054 663 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 PRKCHP24723 683 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 TTKP33981 857 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 TRAF3Q13114 568 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 FAM174BQ3ZCQ3 159 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 LYSMD3Q7Z3D4 306 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 PROSER1Q86XN7 944 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 FLCNQ8NFG4 579 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 OR10A6Q8NH74 314 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 LRTOMTQ8WZ04 291 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 MTERF1Q99551 399 aaKnown RBP14.2□□□□□ -0.14
SCARB2-208ENST00000638372 DUS2Q9NX74 493 aaKnown RBP14.2□□□□□ -0.14
SCARB2-208ENST00000638372 MYH15Q9Y2K3 1946 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 SMIM31A0A1B0GVY4 71 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 CCDC189A1A4V9 331 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 G3V2T6 193 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 NFATC1O95644 943 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 PRNPP04156 253 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 FAM163BP0C2L3 166 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 IFNGR2P38484 337 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 SLC18A2Q05940 514 aa14.2□□□□□ -0.14
SCARB2-208ENST00000638372 USP39Q53GS9 565 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms