RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 KBTBD8Q8NFY9 601 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 GIMAP5Q96F15 307 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 PDLIM5Q96HC4 596 aaKnown RBP11.9□□□□□ -0.51
CAPN3-221ENST00000638141 LRCH3Q96II8 777 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 CPB2Q96IY4 423 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 SDHCQ99643 169 aaPredicted RBP11.9□□□□□ -0.51
CAPN3-221ENST00000638141 ZSCAN5AQ9BUG6 496 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 ACOT13Q9NPJ3 140 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 GGA3Q9NZ52 723 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 ERVW-1Q9UQF0 538 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 LYVE1Q9Y5Y7 322 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 OAS3Q9Y6K5 1087 aaKnown RBP11.9□□□□□ -0.51
CAPN3-221ENST00000638141 A0A087X1B8 175 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 ATP6AP2A0A1C7CYW4 349 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 OR2A25A4D2G3 310 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 DDTLA6NHG4 134 aaPredicted RBP11.89□□□□□ -0.51
CAPN3-221ENST00000638141 FAM25EA8MYX2 175 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 K7ERI5 159 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 EEF2KO00418 725 aaKnown RBP11.89□□□□□ -0.51
CAPN3-221ENST00000638141 ANGPTL1O95841 491 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 FTH1P02794 183 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 ICAM1P05362 532 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 SUPT20HL2P0C7V6 817 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 DBTP11182 482 aaKnown RBP11.89□□□□□ -0.51
CAPN3-221ENST00000638141 PSKH1P11801 424 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 CD36P16671 472 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 PSMB9P28065 219 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 UQCRC1P31930 480 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 GBE1Q04446 702 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 LIPEQ05469 1076 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 SMARCB1Q12824 385 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 DOK7Q18PE1 504 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 UGT3A2Q3SY77 523 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 SPANXN2Q5MJ10 180 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 SDE2Q6IQ49 451 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 TXNDC5Q8NBS9 432 aaKnown RBP11.89□□□□□ -0.51
CAPN3-221ENST00000638141 FLCNQ8NFG4 579 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 IL31RAQ8NI17 732 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 KCTD4Q8WVF5 259 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 LPAR1Q92633 364 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 RNF145Q96MT1 663 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 SIGLEC11Q96RL6 698 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 C6orf62Q9GZU0 229 aaPredicted RBP11.89□□□□□ -0.51
CAPN3-221ENST00000638141 XYLT2Q9H1B5 865 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 CYP3A43Q9HB55 503 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 SLC52A3Q9NQ40 469 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 ACSS2Q9NR19 701 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 FAM49BQ9NUQ9 324 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 SCN3BQ9NY72 215 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 DNAJB9Q9UBS3 223 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 GABBR1Q9UBS5 961 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 ACOT9Q9Y305 439 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 KCNE2Q9Y6J6 123 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 CSNK1G3Q9Y6M4 447 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 COL4A5P29400 1685 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 ATP6V1G2-DDX39BF2Z307 99 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 NR5A2O00482 541 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 STX7O15400 261 aaKnown RBP11.89□□□□□ -0.51
CAPN3-221ENST00000638141 NPPAP01160 153 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 ALPPP05187 535 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 ALDOCP09972 364 aaKnown RBP11.89□□□□□ -0.51
CAPN3-221ENST00000638141 ICAM2P13598 275 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 RPL17P18621 184 aaKnown RBP11.89□□□□□ -0.51
CAPN3-221ENST00000638141 HRH2P25021 359 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 SDC4P31431 198 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 CSTF2P33240 577 aaKnown RBP eCLIP11.89□□□□□ -0.51
CAPN3-221ENST00000638141 CLK1P49759 484 aaKnown RBP11.89□□□□□ -0.51
CAPN3-221ENST00000638141 SNX16P57768 344 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 FPGSQ05932 587 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 SNTA1Q13424 505 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 EFR3AQ14156 821 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 DSC3Q14574 896 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 TRNP1Q6NT89 227 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 NRARPQ7Z6K4 114 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 CUZD1Q86UP6 607 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 KCNMB4Q86W47 210 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 MIER2Q8N344 545 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 PAF1Q8N7H5 531 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 ZMIZ2Q8NF64 920 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 ATXN7L3BQ96GX2 97 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 NSMCE2Q96MF7 247 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 CASS4Q9NQ75 786 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 ERVK-18Q9QC07 812 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 SLC39A10Q9ULF5 831 aa11.89□□□□□ -0.51
CAPN3-221ENST00000638141 NOSIPQ9Y314 301 aaKnown RBP11.89□□□□□ -0.51
CAPN3-221ENST00000638141 LTBP3Q9NS15 1303 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 AP3D1O14617 1153 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 PRMT5O14744 637 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-221ENST00000638141 DSCR3O14972 297 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 SSX4O60224 188 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 CPNE3O75131 537 aaKnown RBP11.88□□□□□ -0.51
CAPN3-221ENST00000638141 GDF11O95390 407 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 TNNC2P02585 160 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 C1QBP02746 253 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 MAGP20916 626 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 HLA-DMAP28067 261 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 CRKP46108 304 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 TKTL1P51854 596 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 GRIK2Q13002 908 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 GRM3Q14832 879 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms