RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 GABRG3Q99928 467 aa15.36■□□□□ 0.05
CLN8-209ENST00000635970 IER2Q9BTL4 223 aa15.36■□□□□ 0.05
CLN8-209ENST00000635970 EFHD1Q9BUP0 239 aa15.36■□□□□ 0.05
CLN8-209ENST00000635970 NUF2Q9BZD4 464 aa15.36■□□□□ 0.05
CLN8-209ENST00000635970 MTG2Q9H4K7 406 aa15.36■□□□□ 0.05
CLN8-209ENST00000635970 DNAAF2Q9NVR5 837 aaKnown RBP15.36■□□□□ 0.05
CLN8-209ENST00000635970 TUBA8Q9NY65 449 aaPredicted RBP15.36■□□□□ 0.05
CLN8-209ENST00000635970 SLCO3A1Q9UIG8 710 aa15.36■□□□□ 0.05
CLN8-209ENST00000635970 ZNF701M0R085 212 aaPredicted RBP15.35■□□□□ 0.05
CLN8-209ENST00000635970 CBX4O00257 560 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 DCLK1O15075 740 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 PIGNO95427 931 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 ENO3P13929 434 aaPredicted RBP15.35■□□□□ 0.05
CLN8-209ENST00000635970 CXCL12P48061 93 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 HCAR3P49019 387 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 PXNP49023 591 aaPredicted RBP15.35■□□□□ 0.05
CLN8-209ENST00000635970 CCR3P51677 355 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 ARF5P84085 180 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 PPIDQ08752 370 aaKnown RBP15.35■□□□□ 0.05
CLN8-209ENST00000635970 NSUN2Q08J23 767 aaKnown RBP eCLIP15.35■□□□□ 0.05
CLN8-209ENST00000635970 CRY1Q16526 586 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 ARL13AQ5H913 290 aaPredicted RBP15.35■□□□□ 0.05
CLN8-209ENST00000635970 FAM182AQ5T1J6 154 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 C6orf52Q5T4I8 152 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 IL31Q6EBC2 164 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 DHRS4L2Q6PKH6 230 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 ZNF783Q6ZMS7 281 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 TRMT11Q7Z4G4 463 aaKnown RBP15.35■□□□□ 0.05
CLN8-209ENST00000635970 ZNF354CQ86Y25 554 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 TRIML2Q8N7C3 387 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 HMCESQ96FZ2 354 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 MAELQ96JY0 434 aaKnown RBP15.35■□□□□ 0.05
CLN8-209ENST00000635970 FAR2Q96K12 515 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 GPR22Q99680 433 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 TMEM245Q9H330 911 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 RETREG1Q9H6L5 497 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 WDR55Q9H6Y2 383 aaPredicted RBP15.35■□□□□ 0.05
CLN8-209ENST00000635970 PRMT8Q9NR22 394 aaPredicted RBP15.35■□□□□ 0.05
CLN8-209ENST00000635970 PNPLA3Q9NST1 481 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 TRHDEQ9UKU6 1024 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 SARDHQ9UL12 918 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 AP4S1Q9Y587 144 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 A0A0J9YVX5 310 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 A0A1W2PQF6 199 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 TTC34A8MYJ7 566 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 K7ESF4 209 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 CFLARO15519 480 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 GALR2O43603 387 aaPredicted RBP15.35■□□□□ 0.05
CLN8-209ENST00000635970 NPHS1O60500 1241 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 MT-CO1P00395 513 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 EPHX1P07099 455 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 MPSTP25325 297 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 EPHA3P29320 983 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 SLC5A2P31639 672 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 ZNF135P52742 658 aaPredicted RBP15.35■□□□□ 0.05
CLN8-209ENST00000635970 NUP107P57740 925 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 RHDQ02161 417 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 DMWDQ09019 674 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 ENPP2Q13822 863 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 ANGPT1Q15389 498 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 UGP2Q16851 508 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 EOGTQ5NDL2 527 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 KCNMB4Q86W47 210 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 ARHGAP12Q8IWW6 846 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 UMODL1-AS1Q8N2C9 162 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 CCNYQ8ND76 341 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 CEP70Q8NHQ1 597 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 VPS39Q96JC1 886 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 VAT1Q99536 393 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 C2orf49Q9BVC5 232 aaPredicted RBP15.35■□□□□ 0.05
CLN8-209ENST00000635970 VPS45Q9NRW7 570 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 DDX18Q9NVP1 670 aaKnown RBP15.35■□□□□ 0.05
CLN8-209ENST00000635970 TBCCD1Q9NVR7 557 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 IPO11Q9UI26 975 aaKnown RBP15.35■□□□□ 0.05
CLN8-209ENST00000635970 SLC8A2Q9UPR5 921 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 MYRFQ9Y2G1 1151 aa15.35■□□□□ 0.05
CLN8-209ENST00000635970 K7ERQ8 282 aa15.34■□□□□ 0.05
CLN8-209ENST00000635970 PSMD3O43242 534 aa15.34■□□□□ 0.05
CLN8-209ENST00000635970 CDKL1Q00532 357 aa15.34■□□□□ 0.05
CLN8-209ENST00000635970 PTK2BQ14289 1009 aa15.34■□□□□ 0.05
CLN8-209ENST00000635970 CARM1Q86X55 608 aa15.34■□□□□ 0.05
CLN8-209ENST00000635970 AFAP1L2Q8N4X5 818 aa15.34■□□□□ 0.05
CLN8-209ENST00000635970 PRSS33Q8NF86 280 aa15.34■□□□□ 0.05
CLN8-209ENST00000635970 OR52K1Q8NGK4 314 aa15.34■□□□□ 0.05
CLN8-209ENST00000635970 STYXQ8WUJ0 223 aa15.34■□□□□ 0.05
CLN8-209ENST00000635970 CCT7Q99832 543 aa15.34■□□□□ 0.05
CLN8-209ENST00000635970 SLC39A8Q9C0K1 460 aa15.34■□□□□ 0.05
CLN8-209ENST00000635970 MAGEH1Q9H213 219 aa15.34■□□□□ 0.05
CLN8-209ENST00000635970 RHOJQ9H4E5 214 aa15.34■□□□□ 0.05
CLN8-209ENST00000635970 KLHL8Q9P2G9 620 aaPredicted RBP15.34■□□□□ 0.05
CLN8-209ENST00000635970 SLC25A13Q9UJS0 675 aa15.34■□□□□ 0.05
CLN8-209ENST00000635970 PTBP2Q9UKA9 531 aaKnown RBP15.34■□□□□ 0.05
CLN8-209ENST00000635970 VAPBO95292 243 aa15.33■□□□□ 0.05
CLN8-209ENST00000635970 CHRNGP07510 517 aa15.33■□□□□ 0.05
CLN8-209ENST00000635970 KPNA2P52292 529 aaKnown RBP15.33■□□□□ 0.05
CLN8-209ENST00000635970 ST8SIA6P61647 398 aa15.33■□□□□ 0.05
CLN8-209ENST00000635970 CSTF1Q05048 431 aaKnown RBP15.33■□□□□ 0.05
CLN8-209ENST00000635970 KCTD11Q693B1 232 aa15.33■□□□□ 0.05
CLN8-209ENST00000635970 ITPRIPL1Q6GPH6 555 aa15.33■□□□□ 0.05
CLN8-209ENST00000635970 SDE2Q6IQ49 451 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms