RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 FBXO5Q9UKT4 447 aa13.45□□□□□ -0.26
NEK3-210ENST00000620675 GPSM3Q9Y4H4 160 aa13.45□□□□□ -0.26
NEK3-210ENST00000620675 UNC13CQ8NB66 2214 aa13.45□□□□□ -0.26
NEK3-210ENST00000620675 A0A1B0GTQ1 180 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 UBA6A0AVT1 1052 aaPredicted RBP13.44□□□□□ -0.26
NEK3-210ENST00000620675 TNFRSF10CO14798 259 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 GRID2O43424 1007 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 PIAS2O75928 621 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 FAM155BO75949 473 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 AHSGP02765 367 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 IVLP07476 585 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 ATP1B2P14415 290 aaPredicted RBP13.44□□□□□ -0.26
NEK3-210ENST00000620675 ITGB6P18564 788 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 PMLP29590 882 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 PBLDP30039 288 aaPredicted RBP13.44□□□□□ -0.26
NEK3-210ENST00000620675 UAP1Q16222 522 aaPredicted RBP13.44□□□□□ -0.26
NEK3-210ENST00000620675 KBTBD12Q3ZCT8 623 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 CTSL3PQ5NE16 218 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 MRNIPQ6NTE8 343 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 ZNF549Q6P9A3 640 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 PRR23CQ6ZRP0 262 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 RABEPKQ7Z6M1 372 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 SLC25A45Q8N413 288 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 C2CD4AQ8NCU7 369 aaPredicted RBP13.44□□□□□ -0.26
NEK3-210ENST00000620675 ACVR1CQ8NER5 493 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 AENQ8WTP8 325 aaKnown RBP13.44□□□□□ -0.26
NEK3-210ENST00000620675 SKA1Q96BD8 255 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 TTC25Q96NG3 672 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 BIRC8Q96P09 236 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 RAB21Q9UL25 225 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 KCNK6Q9Y257 313 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 DGKBQ9Y6T7 804 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 VEGFDO43915 354 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 MAGEC1O60732 1142 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 ACP5P13686 325 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 KELP23276 732 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 EIF3BP55884 814 aaKnown RBP13.44□□□□□ -0.26
NEK3-210ENST00000620675 CTBSQ01459 385 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 MGAT5Q09328 741 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 CNTN4Q8IWV2 1026 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 KRT222Q8N1A0 295 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 ZNF548Q8NEK5 533 aaPredicted RBP13.44□□□□□ -0.26
NEK3-210ENST00000620675 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.44□□□□□ -0.26
NEK3-210ENST00000620675 MRRFQ96E11 262 aaKnown RBP13.44□□□□□ -0.26
NEK3-210ENST00000620675 ATXN7L3BQ96GX2 97 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 EDEM2Q9BV94 578 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 P2RY12Q9H244 342 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 ERVMER34-1Q9H9K5 563 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 GALPQ9UBC7 116 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 RABGEF1Q9UJ41 708 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 DNAJC16Q9Y2G8 782 aa13.44□□□□□ -0.26
NEK3-210ENST00000620675 FAM159BA6NKW6 160 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 NDUFS3O75489 264 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 EML2O95834 649 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 SYPP08247 313 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 GIMD1P0DJR0 217 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 OGNP20774 298 aaKnown RBP13.43□□□□□ -0.26
NEK3-210ENST00000620675 DGKAP23743 735 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 FMO4P31512 558 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 TTPAP49638 278 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 PMS2P54278 862 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 TUBB4BP68371 445 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 FRG1Q14331 258 aaKnown RBP13.43□□□□□ -0.26
NEK3-210ENST00000620675 PACS1Q6VY07 963 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 CERS6Q6ZMG9 384 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 FAM83HQ6ZRV2 1179 aaPredicted RBP13.43□□□□□ -0.26
NEK3-210ENST00000620675 KANSL1Q7Z3B3 1105 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 GALNT13Q8IUC8 556 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 EIF1ADQ8N9N8 165 aaKnown RBP13.43□□□□□ -0.26
NEK3-210ENST00000620675 LMX1AQ8TE12 382 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 DCUN1D1Q96GG9 259 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 OR2M4Q96R27 311 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 NDNQ99608 321 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 ZFATQ9P243 1243 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 MED16Q9Y2X0 877 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 RIPK2O43353 540 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 NIPSNAP2O75323 286 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 TNFP01375 233 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 EPHA8P29322 1005 aaPredicted RBP13.43□□□□□ -0.26
NEK3-210ENST00000620675 NSG1P42857 185 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 RXRGP48443 463 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 ITIH4Q14624 930 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 RBM20Q5T481 1227 aaKnown RBP13.43□□□□□ -0.26
NEK3-210ENST00000620675 SLC30A9Q6PML9 568 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 LRRTM4Q86VH4 590 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 SAP25Q8TEE9 199 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 FAM167BQ9BTA0 163 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 SLC13A1Q9BZW2 595 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 BTBD3Q9Y2F9 522 aa13.43□□□□□ -0.26
NEK3-210ENST00000620675 PRMT5O14744 637 aaPredicted RBP13.42□□□□□ -0.26
NEK3-210ENST00000620675 FFAR2O15552 330 aa13.42□□□□□ -0.26
NEK3-210ENST00000620675 GFRA3O60609 400 aa13.42□□□□□ -0.26
NEK3-210ENST00000620675 LRP3O75074 770 aa13.42□□□□□ -0.26
NEK3-210ENST00000620675 POP7O75817 140 aaKnown RBP13.42□□□□□ -0.26
NEK3-210ENST00000620675 MYF5P13349 255 aa13.42□□□□□ -0.26
NEK3-210ENST00000620675 LEPRP48357 1165 aaKnown RBP13.42□□□□□ -0.26
NEK3-210ENST00000620675 PRLHRP49683 370 aa13.42□□□□□ -0.26
NEK3-210ENST00000620675 TIAL1Q01085 375 aaKnown RBP eCLIP13.42□□□□□ -0.26
NEK3-210ENST00000620675 NFE2L1Q14494 772 aa13.42□□□□□ -0.26
NEK3-210ENST00000620675 SLMAPQ14BN4 828 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms