RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 CENPSQ8N2Z9 138 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 C1orf216Q8TAB5 229 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 FAM45AQ8TCE6 357 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 CHAC2Q8WUX2 184 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 TFAP2CQ92754 450 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 ZNF689Q96CS4 500 aaPredicted RBP6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 NSMCE2Q96MF7 247 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 SLC2A11Q9BYW1 496 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 ATXN3LQ9H3M9 355 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 ENTPD7Q9NQZ7 604 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 TMEM9Q9P0T7 183 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 GNPTGQ9UJJ9 305 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 ZNF229Q9UJW7 825 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 TCRBV3S1A0A5B6 114 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 J3QRK9 145 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 HAX1O00165 279 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 LBPP18428 481 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 ZNF135P52742 658 aaPredicted RBP6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 SQSTM1Q13501 440 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 RAB39AQ14964 217 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 ZIK1Q3SY52 487 aaPredicted RBP6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 AARS2Q5JTZ9 985 aaKnown RBP6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 BRMS1LQ5PSV4 323 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 CCNYL2Q5T2Q4 361 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 INTS11Q5TA45 600 aaKnown RBP6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 ESRP1Q6NXG1 681 aaKnown RBP6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 PSRC1Q6PGN9 363 aaPredicted RBP6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 CNSTQ6PJW8 725 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 OTOP3Q7RTS5 596 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 ADCK1Q86TW2 530 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 CHPFQ8IZ52 775 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 PDPRQ8NCN5 879 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 BPIFB6Q8NFQ5 453 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 DNAJB14Q8TBM8 379 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 GRIN3AQ8TCU5 1115 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 HDAC10Q969S8 669 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 FBXL8Q96CD0 374 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 PGAP3Q96FM1 320 aaPredicted RBP6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 FBXL20Q96IG2 436 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 TEKT5Q96M29 485 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 ASB2Q96Q27 587 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 KLHL25Q9H0H3 589 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 SMOC2Q9H3U7 446 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 C12orf49Q9H741 205 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 CCM2LQ9NUG4 571 aaPredicted RBP6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 TYW5A2RUC4 315 aaKnown RBP6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 TSPAN6O43657 245 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 SEC24AO95486 1093 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 CLIC3O95833 236 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 MYF6P23409 242 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 NFKBIAP25963 317 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 SLC1A2P43004 574 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 BCAP31P51572 246 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 EPHB3P54753 998 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 EMP3P54852 163 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 DNAJB13P59910 316 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 IL1RL1Q01638 556 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 CHRNB3Q05901 458 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 TWF1Q12792 350 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 PPP1R3AQ16821 1122 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 DUS1LQ6P1R4 473 aaKnown RBP6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 ATG14Q6ZNE5 492 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 DDX53Q86TM3 631 aaKnown RBP6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 STK32CQ86UX6 486 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 SCML4Q8N228 414 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 ATP6V0D2Q8N8Y2 350 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 LEMD2Q8NC56 503 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 ACVR1CQ8NER5 493 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 ZUFSPQ96AP4 578 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 FANCEQ9HB96 536 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 OLA1Q9NTK5 396 aaKnown RBP6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 RBM22Q9NW64 420 aaKnown RBP eCLIP6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 MPP6Q9NZW5 540 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 PCDHB10Q9UN67 800 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 YIPF1Q9Y548 306 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 FRMPD3Q5JV73 1810 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 A8MT66 165 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 FBP2O00757 339 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 TEX28O15482 410 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 IRF1P10914 325 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 HGFP14210 728 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 ATF6P18850 670 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 ATP5C1P36542 298 aaKnown RBP6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 CDH13P55290 713 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 RELAQ04206 551 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 C4orf46Q504U0 113 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 TMEM240Q5SV17 173 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 TPGS2Q68CL5 300 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 OGFOD2Q6N063 350 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 C6orf15Q6UXA7 325 aaPredicted RBP6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 EFL1Q7Z2Z2 1120 aaKnown RBP6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 TFAP2DQ7Z6R9 452 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 CENPLQ8N0S6 344 aaPredicted RBP6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 C8orf59Q8N0T1 100 aaPredicted RBP6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 SPATA22Q8NHS9 363 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 RAB2BQ8WUD1 216 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 STON2Q8WXE9 905 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 SLC45A3Q96JT2 553 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 HTATIP2Q9BUP3 242 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 KIFC1Q9BW19 673 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms