RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 SEMA4CQ9C0C4 833 aa21.5■■□□□ 1.03
CBWD3-207ENST00000611426 B3GNT4Q9C0J1 378 aa21.5■■□□□ 1.03
CBWD3-207ENST00000611426 ZMYND15Q9H091 742 aa21.5■■□□□ 1.03
CBWD3-207ENST00000611426 RMI1Q9H9A7 625 aa21.5■■□□□ 1.03
CBWD3-207ENST00000611426 ZFYVE1Q9HBF4 777 aa21.5■■□□□ 1.03
CBWD3-207ENST00000611426 WHRNQ9P202 907 aa21.5■■□□□ 1.03
CBWD3-207ENST00000611426 PCYT1BQ9Y5K3 369 aaPredicted RBP21.5■■□□□ 1.03
CBWD3-207ENST00000611426 ESYT3A0FGR9 886 aa21.49■■□□□ 1.03
CBWD3-207ENST00000611426 MAP2K7O14733 419 aa21.49■■□□□ 1.03
CBWD3-207ENST00000611426 PPP1R12AO14974 1030 aaPredicted RBP21.49■■□□□ 1.03
CBWD3-207ENST00000611426 EML2O95834 649 aa21.49■■□□□ 1.03
CBWD3-207ENST00000611426 MPSTP25325 297 aa21.49■■□□□ 1.03
CBWD3-207ENST00000611426 IVDP26440 423 aa21.49■■□□□ 1.03
CBWD3-207ENST00000611426 NR2C2P49116 596 aa21.49■■□□□ 1.03
CBWD3-207ENST00000611426 GPLD1P80108 840 aa21.49■■□□□ 1.03
CBWD3-207ENST00000611426 SRSF6Q13247 344 aaKnown RBP21.49■■□□□ 1.03
CBWD3-207ENST00000611426 NPNTQ6UXI9 565 aa21.49■■□□□ 1.03
CBWD3-207ENST00000611426 LYSMD3Q7Z3D4 306 aa21.49■■□□□ 1.03
CBWD3-207ENST00000611426 MREGQ8N565 214 aa21.49■■□□□ 1.03
CBWD3-207ENST00000611426 CCDC89Q8N998 374 aa21.49■■□□□ 1.03
CBWD3-207ENST00000611426 ZDHHC18Q9NUE0 388 aa21.49■■□□□ 1.03
CBWD3-207ENST00000611426 GRHL1Q9NZI5 618 aa21.49■■□□□ 1.03
CBWD3-207ENST00000611426 FGF3P11487 239 aaPredicted RBP21.48■■□□□ 1.03
CBWD3-207ENST00000611426 PLA2G2AP14555 144 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 CSTF2P33240 577 aaKnown RBP eCLIP21.48■■□□□ 1.03
CBWD3-207ENST00000611426 DYNLT1P63172 113 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 SNX1Q13596 522 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 TRADDQ15628 312 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 TMEM71Q6P5X7 295 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 ZNF761Q86XN6 746 aaPredicted RBP21.48■■□□□ 1.03
CBWD3-207ENST00000611426 AGBL5Q8NDL9 886 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 SGF29Q96ES7 293 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 IMP4Q96G21 291 aaKnown RBP21.48■■□□□ 1.03
CBWD3-207ENST00000611426 TAAR9Q96RI9 348 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 VIPAS39Q9H9C1 493 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 TBC1D29Q9UFV1 150 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 NFU1Q9UMS0 254 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 KCNK6Q9Y257 313 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 SEC31AO94979 1220 aaKnown RBP21.48■■□□□ 1.03
CBWD3-207ENST00000611426 THRAP10827 490 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 ACP5P13686 325 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 CSF2RBP32927 897 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 RPL21P46778 160 aaKnown RBP21.48■■□□□ 1.03
CBWD3-207ENST00000611426 XRCC4Q13426 336 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 PPP1R7Q15435 360 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 PCSK7Q16549 785 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 B4GALNT4Q76KP1 1039 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 HDXQ7Z353 690 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 VASH2Q86V25 355 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 DTX1Q86Y01 620 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 OR10G6Q8NH81 332 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 P3H4Q92791 437 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 EID2BQ96D98 161 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 MED8Q96G25 268 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 OLFM3Q96PB7 478 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 TRIB3Q96RU7 358 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 SPATA16Q9BXB7 569 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 BRD8Q9H0E9 1235 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 SLC25A51Q9H1U9 297 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 STN1Q9H668 368 aaKnown RBP21.48■■□□□ 1.03
CBWD3-207ENST00000611426 TMEM9Q9P0T7 183 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 SHOC2Q9UQ13 582 aa21.48■■□□□ 1.03
CBWD3-207ENST00000611426 COL6A6A6NMZ7 2263 aa21.47■■□□□ 1.03
CBWD3-207ENST00000611426 GRID2O43424 1007 aa21.47■■□□□ 1.03
CBWD3-207ENST00000611426 SNX2O60749 519 aa21.47■■□□□ 1.03
CBWD3-207ENST00000611426 ZNF189O75820 626 aaPredicted RBP21.47■■□□□ 1.03
CBWD3-207ENST00000611426 PIRTP0C851 137 aa21.47■■□□□ 1.03
CBWD3-207ENST00000611426 PECAM1P16284 738 aaPredicted RBP21.47■■□□□ 1.03
CBWD3-207ENST00000611426 HHEXQ03014 270 aa21.47■■□□□ 1.03
CBWD3-207ENST00000611426 CDK18Q07002 472 aa21.47■■□□□ 1.03
CBWD3-207ENST00000611426 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.47■■□□□ 1.03
CBWD3-207ENST00000611426 ALS2CLQ60I27 953 aa21.47■■□□□ 1.03
CBWD3-207ENST00000611426 IYDQ6PHW0 289 aa21.47■■□□□ 1.03
CBWD3-207ENST00000611426 ZDHHC24Q6UX98 284 aa21.47■■□□□ 1.03
CBWD3-207ENST00000611426 ZSCAN1Q8NBB4 408 aa21.47■■□□□ 1.03
CBWD3-207ENST00000611426 BBOF1Q8ND07 529 aa21.47■■□□□ 1.03
CBWD3-207ENST00000611426 IFT81Q8WYA0 676 aa21.47■■□□□ 1.03
CBWD3-207ENST00000611426 RTP4Q96DX8 246 aa21.47■■□□□ 1.03
CBWD3-207ENST00000611426 MAGEE1Q9HCI5 957 aa21.47■■□□□ 1.03
CBWD3-207ENST00000611426 ATXN10Q9UBB4 475 aa21.47■■□□□ 1.03
CBWD3-207ENST00000611426 ZNF148Q9UQR1 794 aa21.47■■□□□ 1.03
CBWD3-207ENST00000611426 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.46■■□□□ 1.03
CBWD3-207ENST00000611426 STMND1H3BQB6 276 aa21.46■■□□□ 1.03
CBWD3-207ENST00000611426 NDC80O14777 642 aa21.46■■□□□ 1.03
CBWD3-207ENST00000611426 DUX1O43812 170 aa21.46■■□□□ 1.03
CBWD3-207ENST00000611426 NUAK1O60285 661 aa21.46■■□□□ 1.03
CBWD3-207ENST00000611426 SLC25A14O95258 325 aaPredicted RBP21.46■■□□□ 1.03
CBWD3-207ENST00000611426 SLC4A1P02730 911 aa21.46■■□□□ 1.03
CBWD3-207ENST00000611426 STIP1P31948 543 aaKnown RBP21.46■■□□□ 1.03
CBWD3-207ENST00000611426 EIF3EP60228 445 aaKnown RBP21.46■■□□□ 1.03
CBWD3-207ENST00000611426 CAV1Q03135 178 aa21.46■■□□□ 1.03
CBWD3-207ENST00000611426 NFATC2Q13469 925 aa21.46■■□□□ 1.03
CBWD3-207ENST00000611426 TMC3Q7Z5M5 1100 aa21.46■■□□□ 1.03
CBWD3-207ENST00000611426 SLC9B2Q86UD5 537 aa21.46■■□□□ 1.03
CBWD3-207ENST00000611426 GSPT2Q8IYD1 628 aaKnown RBP21.46■■□□□ 1.03
CBWD3-207ENST00000611426 GPR26Q8NDV2 337 aa21.46■■□□□ 1.03
CBWD3-207ENST00000611426 ART4Q93070 314 aa21.46■■□□□ 1.03
CBWD3-207ENST00000611426 SH3KBP1Q96B97 665 aa21.46■■□□□ 1.03
CBWD3-207ENST00000611426 ZSCAN5AQ9BUG6 496 aa21.46■■□□□ 1.03
CBWD3-207ENST00000611426 GPR63Q9BZJ6 419 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms