RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-221	ENST00000607055	CTAGE3P	Q8IX95	158 aa		21.33	■■□□□ 1.01
NECAB3-221	ENST00000607055	MYRIP	Q8NFW9	859 aa		21.33	■■□□□ 1.01
NECAB3-221	ENST00000607055	SCG3	Q8WXD2	468 aa	Known RBP	21.33	■■□□□ 1.01
NECAB3-221	ENST00000607055	TM7SF3	Q9NS93	570 aa		21.33	■■□□□ 1.01
NECAB3-221	ENST00000607055	VPS9D1	Q9Y2B5	631 aa		21.33	■■□□□ 1.01
NECAB3-221	ENST00000607055	CRYL1	Q9Y2S2	319 aa		21.33	■■□□□ 1.01
NECAB3-221	ENST00000607055	CACNA1E	Q15878	2313 aa		21.33	■■□□□ 1
NECAB3-221	ENST00000607055	TP53BP1	Q12888	1972 aa	Predicted RBP	21.32	■■□□□ 1
NECAB3-221	ENST00000607055	RIPK2	O43353	540 aa		21.32	■■□□□ 1
NECAB3-221	ENST00000607055	SGTA	O43765	313 aa		21.32	■■□□□ 1
NECAB3-221	ENST00000607055	SDC3	O75056	442 aa		21.32	■■□□□ 1
NECAB3-221	ENST00000607055	HAUS5	O94927	633 aa		21.32	■■□□□ 1
NECAB3-221	ENST00000607055	C1QA	P02745	245 aa		21.32	■■□□□ 1
NECAB3-221	ENST00000607055	CTSE	P14091	401 aa		21.32	■■□□□ 1
NECAB3-221	ENST00000607055	FMO4	P31512	558 aa		21.32	■■□□□ 1
NECAB3-221	ENST00000607055	HNRNPK	P61978	463 aa	Known RBP eCLIP	21.32	■■□□□ 1
NECAB3-221	ENST00000607055	EFTUD2	Q15029	972 aa	Known RBP eCLIP	21.32	■■□□□ 1	5e-14	■■■■□ 20.5
NECAB3-221	ENST00000607055	KIAA0408	Q6ZU52	694 aa		21.32	■■□□□ 1
NECAB3-221	ENST00000607055	CHST15	Q7LFX5	561 aa	Predicted RBP	21.32	■■□□□ 1
NECAB3-221	ENST00000607055	ZNF547	Q8IVP9	402 aa		21.32	■■□□□ 1
NECAB3-221	ENST00000607055	MINDY1	Q8N5J2	469 aa		21.32	■■□□□ 1
NECAB3-221	ENST00000607055	BEND7	Q8N7W2	519 aa	Predicted RBP	21.32	■■□□□ 1
NECAB3-221	ENST00000607055	ZNF514	Q96K75	400 aa	Predicted RBP	21.32	■■□□□ 1
NECAB3-221	ENST00000607055	TMEM168	Q9H0V1	697 aa		21.32	■■□□□ 1
NECAB3-221	ENST00000607055	P2RY12	Q9H244	342 aa		21.32	■■□□□ 1
NECAB3-221	ENST00000607055	RABGEF1	Q9UJ41	708 aa		21.32	■■□□□ 1
NECAB3-221	ENST00000607055	PSAT1	Q9Y617	370 aa		21.32	■■□□□ 1
NECAB3-221	ENST00000607055	ADAMTS9	Q9P2N4	1935 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055		A0A087WUV0	522 aa	Predicted RBP	21.31	■■□□□ 1
NECAB3-221	ENST00000607055		A0A1B0GTQ1	180 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	KMO	O15229	486 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	CTIF	O43310	598 aa	Known RBP	21.31	■■□□□ 1
NECAB3-221	ENST00000607055	DFNA5	O60443	496 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	AP2A2	O94973	939 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	OR56A5	P0C7T3	313 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	ACP5	P13686	325 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	PBLD	P30039	288 aa	Predicted RBP	21.31	■■□□□ 1
NECAB3-221	ENST00000607055	ABCG1	P45844	678 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	LEPR	P48357	1165 aa	Known RBP	21.31	■■□□□ 1
NECAB3-221	ENST00000607055	RXRG	P48443	463 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	C1orf61	Q13536	156 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	SHB	Q15464	509 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	BCL7A	Q4VC05	210 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	PRRT3	Q5FWE3	981 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	PTRHD1	Q6GMV3	140 aa	Known RBP	21.31	■■□□□ 1
NECAB3-221	ENST00000607055	CNST	Q6PJW8	725 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	STRA8	Q7Z7C7	330 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	SLC26A11	Q86WA9	606 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	LRRC6	Q86X45	466 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	PPM1N	Q8N819	430 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	LMX1A	Q8TE12	382 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	UBLCP1	Q8WVY7	318 aa	Predicted RBP	21.31	■■□□□ 1
NECAB3-221	ENST00000607055	CYTH2	Q99418	400 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	LRRC61	Q9BV99	259 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	ACSS3	Q9H6R3	686 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	NSMCE4A	Q9NXX6	385 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	SPAST	Q9UBP0	616 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	GNPTG	Q9UJJ9	305 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	GPR34	Q9UPC5	381 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	PLEKHM1	Q9Y4G2	1056 aa		21.31	■■□□□ 1
NECAB3-221	ENST00000607055	KNL1	Q8NG31	2342 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	LRP4	O75096	1905 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	RALGAPA1	Q6GYQ0	2036 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	POP7	O75817	140 aa	Known RBP	21.3	■■□□□ 1
NECAB3-221	ENST00000607055	PIAS2	O75928	621 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	AHSG	P02765	367 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	ABHD2	P08910	425 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	TGM1	P22735	817 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	RPS3	P23396	243 aa	Known RBP eCLIP	21.3	■■□□□ 1
NECAB3-221	ENST00000607055	GABRB3	P28472	473 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	CD151	P48509	253 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	PRLHR	P49683	370 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	CCT8	P50990	548 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	BNIP3	Q12983	259 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	INSC	Q1MX18	579 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	MAP9	Q49MG5	647 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	CTSL3P	Q5NE16	218 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	PRR23C	Q6ZRP0	262 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	CAVIN3	Q969G5	261 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	MRRF	Q96E11	262 aa	Known RBP	21.3	■■□□□ 1
NECAB3-221	ENST00000607055	EDEM2	Q9BV94	578 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	FUT8	Q9BYC5	575 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	EPB41L4B	Q9H329	900 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	TRNAU1AP	Q9NX07	287 aa	Known RBP	21.3	■■□□□ 1
NECAB3-221	ENST00000607055	TXNDC16	Q9P2K2	825 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	SLC23A2	Q9UGH3	650 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	PCDHB1	Q9Y5F3	818 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	OTOGL	Q3ZCN5	2332 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	TMEM131	Q92545	1883 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055	VPS13A	Q96RL7	3174 aa		21.3	■■□□□ 1
NECAB3-221	ENST00000607055		F8W8V4	182 aa		21.29	■■□□□ 1
NECAB3-221	ENST00000607055	QSOX1	O00391	747 aa		21.29	■■□□□ 1
NECAB3-221	ENST00000607055	CELA2B	P08218	269 aa	Predicted RBP	21.29	■■□□□ 1
NECAB3-221	ENST00000607055	PKM	P14618	531 aa	Known RBP	21.29	■■□□□ 1
NECAB3-221	ENST00000607055	ITGB6	P18564	788 aa		21.29	■■□□□ 1
NECAB3-221	ENST00000607055	EPHA8	P29322	1005 aa	Predicted RBP	21.29	■■□□□ 1
NECAB3-221	ENST00000607055	CTBS	Q01459	385 aa		21.29	■■□□□ 1
NECAB3-221	ENST00000607055	NAB1	Q13506	487 aa		21.29	■■□□□ 1
NECAB3-221	ENST00000607055	SLC29A2	Q14542	456 aa		21.29	■■□□□ 1
NECAB3-221	ENST00000607055	AASDH	Q4L235	1098 aa	Predicted RBP	21.29	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms