RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ZNF221Q9UK13 617 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 CPSF3Q9UKF6 684 aaKnown RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 CFL2Q9Y281 166 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 TRAPPC4Q9Y296 219 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 PCDHGA7Q9Y5G6 932 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 AUP1Q9Y679 476 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 MICAL3Q7RTP6 2002 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 CNTNAP1P78357 1384 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZFC3H1O60293 1989 aaKnown RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 IGKV6D-41A0A0C4DH26 115 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TCRBV7S3A2A0A539 114 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 SLC15A5A6NIM6 579 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CLDN24A6NM45 220 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CXorf49A8MYA2 514 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 KPNA7A9QM74 516 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF487B1APH4 448 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 APOC4-APOC2K7ER74 178 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 MUSKO15146 869 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 RAD51BO15315 384 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 GRID2O43424 1007 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 SYNCRIPO60506 623 aaKnown RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 SNX2O60749 519 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 PPP1R11O60927 126 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TMCC2O75069 709 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TRIM3O75382 744 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TOM1L1O75674 476 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 UGT2B17O75795 530 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CABYRO75952 493 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CNTN5O94779 1100 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 STARD3NLO95772 234 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 HPRP00739 348 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 APOC2P02655 101 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 SLC4A1P02730 911 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CALB1P05937 261 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 YES1P07947 543 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 RPS17P08708 135 aaKnown RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 KRT7P08729 469 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 SUPT20HL2P0C7V6 817 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TRIM49P0CI25 452 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TRIM49CP0CI26 452 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TSPY3P0CV98 308 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TSPY8P0CW00 308 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CYP2D6P10635 497 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 ACADMP11310 421 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 KRT10P13645 584 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 HOXB6P17509 224 aaKnown RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CKMT2P17540 419 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TFEBP19484 476 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TPSB2P20231 275 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 PCMT1P22061 227 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 NR4A1P22736 598 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 MMP8P22894 467 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CRHBPP24387 322 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 KDELR1P24390 212 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 ERP29P30040 261 aaKnown RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 ARRB2P32121 409 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CDH5P33151 784 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 RFC4P35249 363 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 SERPINB5P36952 375 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 POLR2IP36954 125 aaKnown RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TALDO1P37837 337 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 HADHAP40939 763 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 NR4A2P43354 598 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 POLD2P49005 469 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 RPL14P50914 215 aaKnown RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CLCNKBP51801 687 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 UGT2B15P54855 530 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 MYL6P60660 151 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 DSTNP60981 165 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CXCR4P61073 352 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 ACTR2P61160 394 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 COPZ1P61923 177 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 YWHAZP63104 245 aaKnown RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 NOMO3P69849 1222 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 GTF2BQ00403 316 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 PRKAA1Q13131 559 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 SEMA3BQ13214 749 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 NME3Q13232 169 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 AQP6Q13520 282 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TPSAB1Q15661 275 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 CHRNA2Q15822 529 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TYSND1Q2T9J0 566 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 SMU1Q2TAY7 513 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 SLC9B1Q4ZJI4 515 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 MTX3Q5HYI7 312 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 PAGE2BQ5JRK9 111 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 HABP4Q5JVS0 413 aaKnown RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 GPATCH4Q5T3I0 446 aaKnown RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 SYT6Q5T7P8 510 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 N4BP2L1Q5TBK1 243 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 MROH9Q5TGP6 573 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 ARHGEF16Q5VV41 709 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 RSBN1Q5VWQ0 802 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TTC23Q5W5X9 447 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TIGD3Q6B0B8 471 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 LCN8Q6JVE9 175 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 PMF1Q6P1K2 205 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 METTL2BQ6P1Q9 378 aaKnown RBP4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 TAF2Q6P1X5 1199 aa4.04□□□□□ -1.76
HMGB1P50-201ENST00000605814 NSMFQ6X4W1 530 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms