RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 RGS19P49795 217 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 MCCD1P59942 119 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-216ENST00000602557 KLF1Q13351 362 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-216ENST00000602557 ZNHIT3Q15649 155 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-216ENST00000602557 SFT2D3Q587I9 215 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 STXBP5Q5T5C0 1151 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 LRRC55Q6ZSA7 311 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 HM13Q8TCT9 377 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 TM6SF2Q9BZW4 377 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 ACSS3Q9H6R3 686 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 TBC1D30Q9Y2I9 924 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 MEN1O00255 615 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 PLK4O00444 970 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 APOC1P02654 83 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 APOC3P02656 99 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 CSF2P04141 144 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 IDO1P14902 403 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 TUBG1P23258 451 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 ICAM3P32942 547 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 RPL7AP62424 266 aaKnown RBP8.63□□□□□ -1.03
CSMD1-216ENST00000602557 GALNT3Q14435 633 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 SHQ1Q6PI26 577 aaKnown RBP8.63□□□□□ -1.03
CSMD1-216ENST00000602557 C14orf80Q86SX3 495 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 RBM23Q86U06 439 aaKnown RBP8.63□□□□□ -1.03
CSMD1-216ENST00000602557 VANGL1Q8TAA9 524 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-216ENST00000602557 IFT80Q9P2H3 777 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-216ENST00000602557 NPEPPSL1A6NEC2 478 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 SUV39H1O43463 412 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 CATP04040 527 aaKnown RBP8.63□□□□□ -1.03
CSMD1-216ENST00000602557 ANXA5P08758 320 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 PORP16435 677 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-216ENST00000602557 HOXB8P17481 243 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-216ENST00000602557 PSEN2P49810 448 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 TAS2R41P59536 307 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 TLR1Q15399 786 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 MOGQ16653 247 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 ZCCHC12Q6PEW1 402 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 SNX20Q7Z614 316 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 FAM71AQ8IYT1 594 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 LEMD2Q8NC56 503 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 SEMA3CQ99985 751 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 ASB8Q9H765 288 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 ANKRA2Q9H9E1 313 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 ABRQ12979 859 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 MAP4K3Q8IVH8 894 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 PLEKHO2Q8TD55 490 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 PPP1R16AQ96I34 528 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 EXOC2Q96KP1 924 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 DCSTAMPQ9H295 470 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 FANCFQ9NPI8 374 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 ABCC13Q9NSE7 274 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 SOHLH2Q9NX45 425 aa8.63□□□□□ -1.03
CSMD1-216ENST00000602557 PAPSS1O43252 624 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 CTBP1Q13363 440 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 POTEHQ6S545 545 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 CMC1Q7Z7K0 106 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 TMEM86AQ8N2M4 240 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 ALG3Q92685 438 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 KCNQ5Q9NR82 932 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 LMTK2Q8IWU2 1503 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 A0A1W2PPW3 197 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 CHP2O43745 196 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 CCNYL3P0C7X3 344 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 ZNF81P51508 661 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 CLCN5P51795 746 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 FAM76BQ5HYJ3 339 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 MIIPQ5JXC2 388 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 CFAP206Q8IYR0 622 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 CD300LFQ8TDQ1 290 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 JPH3Q8WXH2 748 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 TLCD1Q96CP7 247 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 IGFLR1Q9H665 355 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 SNX15Q9NRS6 342 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 C14orf119Q9NWQ9 140 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 DNMT3LQ9UJW3 386 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 RAP2CQ9Y3L5 183 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 BMP6P22004 513 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 SLC6A2P23975 617 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 MFSD5Q6N075 450 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 KLHL35Q6PF15 583 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 CD101Q93033 1021 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 RERGQ96A58 199 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 PPP3R2Q96LZ3 170 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 DPCDQ9BVM2 203 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 DDX4Q9NQI0 724 aaKnown RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 AKAP7Q9P0M2 348 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 UXTQ9UBK9 157 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 TRAV19A0A0A6YYK7 116 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 SLC22A3O75751 556 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 CTPS1P17812 591 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 ACADLP28330 430 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 ELP6Q0PNE2 266 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 SSX2Q16385 188 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 PTPRNQ16849 979 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 ANKDD1AQ495B1 522 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 ARMC10Q8N2F6 343 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 SNRNP25Q9BV90 132 aaKnown RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 ADARB2Q9NS39 739 aaKnown RBP8.62□□□□□ -1.03
CSMD1-216ENST00000602557 FBXL21Q9UKT6 434 aa8.62□□□□□ -1.03
CSMD1-216ENST00000602557 HIF3AQ9Y2N7 669 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms