RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 RSC1A1Q92681 617 aa12.93□□□□□ -0.34
RPS28-204ENST00000602140 CXorf40BQ96DE9 158 aa12.93□□□□□ -0.34
RPS28-204ENST00000602140 ELMO2Q96JJ3 720 aa12.93□□□□□ -0.34
RPS28-204ENST00000602140 CCDC42Q96M95 316 aa12.93□□□□□ -0.34
RPS28-204ENST00000602140 TTC25Q96NG3 672 aa12.93□□□□□ -0.34
RPS28-204ENST00000602140 EPN3Q9H201 632 aa12.93□□□□□ -0.34
RPS28-204ENST00000602140 ZNF768Q9H5H4 540 aaKnown RBP12.93□□□□□ -0.34
RPS28-204ENST00000602140 NHEJ1Q9H9Q4 299 aaPredicted RBP12.93□□□□□ -0.34
RPS28-204ENST00000602140 WASH6PQ9NQA3 447 aa12.93□□□□□ -0.34
RPS28-204ENST00000602140 ABHD10Q9NUJ1 306 aa12.93□□□□□ -0.34
RPS28-204ENST00000602140 DDX56Q9NY93 547 aaKnown RBP12.93□□□□□ -0.34
RPS28-204ENST00000602140 FAM153AQ9UHL3 310 aa12.93□□□□□ -0.34
RPS28-204ENST00000602140 WDR37Q9Y2I8 494 aa12.93□□□□□ -0.34
RPS28-204ENST00000602140 COL12A1Q99715 3063 aa12.93□□□□□ -0.34
RPS28-204ENST00000602140 CBFA2T2O43439 604 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 SPOPO43791 374 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 KIAA0754O94854 1291 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 NDUFA10O95299 355 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 PECAM1P16284 738 aaPredicted RBP12.92□□□□□ -0.34
RPS28-204ENST00000602140 VCLP18206 1134 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 NFKB1P19838 968 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 CD68P34810 354 aaPredicted RBP12.92□□□□□ -0.34
RPS28-204ENST00000602140 HMGCLP35914 325 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 DLSTP36957 453 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 CDKN2BP42772 138 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 SLC1A1P43005 524 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 CAPZBP47756 277 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 NR2C2P49116 596 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 WNT3AP56704 352 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 WASHC5Q12768 1159 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 GTF2H3Q13889 308 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 TFDP2Q14188 446 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 IL11RAQ14626 422 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 CRTC2Q53ET0 693 aaPredicted RBP12.92□□□□□ -0.34
RPS28-204ENST00000602140 SIRPB2Q5JXA9 342 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 CACHD1Q5VU97 1274 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 KAZNQ674X7 775 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 IRGCQ6NXR0 463 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 KDELC1Q6UW63 502 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 FAM92BQ6ZTR7 304 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 BZW1Q7L1Q6 419 aaKnown RBP12.92□□□□□ -0.34
RPS28-204ENST00000602140 PRSS42Q7Z5A4 293 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 RBM12BQ8IXT5 1001 aaKnown RBP12.92□□□□□ -0.34
RPS28-204ENST00000602140 TTC30BQ8N4P2 665 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 SLC25A41Q8N5S1 370 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 GALNT6Q8NCL4 622 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 BRSK1Q8TDC3 778 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 STAMBPL1Q96FJ0 436 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 ABHD17AQ96GS6 310 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 TRABDQ9H4I3 376 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 IL26Q9NPH9 171 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 CROTQ9UKG9 612 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 PCDHB3Q9Y5E6 796 aa12.92□□□□□ -0.34
RPS28-204ENST00000602140 LOC285095A0A1B0GVY8 99 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 F5H423 210 aaPredicted RBP12.91□□□□□ -0.34
RPS28-204ENST00000602140 UGT1A9O60656 530 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 CST8O60676 142 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 MFAP3LO75121 409 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 TPM1P09493 284 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 UGT1A6P19224 532 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 COMTP21964 271 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 UGT1A1P22309 533 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 UGT1A4P22310 534 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 CASRP41180 1078 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 HALP42357 657 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 CHRNA4P43681 627 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 TNNT3P45378 269 aaPredicted RBP12.91□□□□□ -0.34
RPS28-204ENST00000602140 SEPT6Q14141 434 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 CHRNA6Q15825 494 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 COLEC12Q5KU26 742 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 FAM151BQ6UXP7 276 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 KLHL6Q8WZ60 621 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 ZDHHC12Q96GR4 267 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 ANP32EQ9BTT0 268 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 UGT1A7Q9HAW7 530 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 UGT1A10Q9HAW8 530 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 UGT1A8Q9HAW9 530 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 EPHA6Q9UF33 1036 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 LNPEPQ9UIQ6 1025 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 ANAPC2Q9UJX6 822 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 KCTD3Q9Y597 815 aa12.91□□□□□ -0.34
RPS28-204ENST00000602140 GPR39O43194 453 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 BUD23O43709 281 aaKnown RBP12.9□□□□□ -0.34
RPS28-204ENST00000602140 KATNA1O75449 491 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 SPAG6O75602 509 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 POP7O75817 140 aaKnown RBP12.9□□□□□ -0.34
RPS28-204ENST00000602140 EPOP01588 193 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 FURINP09958 794 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 FGF5P12034 268 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 NELFEP18615 380 aaKnown RBP12.9□□□□□ -0.34
RPS28-204ENST00000602140 SPAM1P38567 509 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 CTSCP53634 463 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 PPP1CAP62136 330 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 ADCY2Q08462 1091 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 ERV3-1Q14264 604 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 IGFBP7Q16270 282 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 PPP2R5EQ16537 467 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 TAZQ16635 292 aa12.9□□□□□ -0.34
RPS28-204ENST00000602140 LACTB2Q53H82 288 aaPredicted RBP12.9□□□□□ -0.34
RPS28-204ENST00000602140 ZDHHC20Q5W0Z9 365 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms