RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 CITED4Q96RK1 184 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 ZDHHC6Q9H6R6 413 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 POLE4Q9NR33 117 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 ANKDD1BA6NHY2 528 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 XPNPEP2O43895 674 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 OR56A5P0C7T3 313 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 DAG1Q14118 895 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 LRRC73Q5JTD7 316 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 AURKBQ96GD4 344 aaPredicted RBP17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 SMOQ99835 787 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 SPATA2Q9UM82 520 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 AQP12BA6NM10 295 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 TBL1XO60907 577 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 SMAD3P84022 425 aaKnown RBP17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 AQP12AQ8IXF9 295 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 NPWQ8N729 165 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 BIRC7Q96CA5 298 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 RBM4BQ9BQ04 359 aaKnown RBP17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 RBM4Q9BWF3 364 aaKnown RBP17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 KLHL1Q9NR64 748 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 SNX6Q9UNH7 406 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 DYRK1BQ9Y463 629 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 UROSP10746 265 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 AKR1A1P14550 325 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 ACVRL1P37023 503 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 PBX3P40426 434 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 IL12RB1P42701 662 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 NUDT6P53370 316 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 ARHGAP1Q07960 439 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 TRIM32Q13049 653 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 MFSD4BQ5TF39 518 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 TXNDC11Q6PKC3 985 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 AKAP14Q86UN6 197 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 LRRC49Q8IUZ0 686 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 ZDHHC21Q8IVQ6 265 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 SLC34A3Q8N130 599 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 UXS1Q8NBZ7 420 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 S100ZQ8WXG8 99 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 KLHL32Q96NJ5 620 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 WDR12Q9GZL7 423 aaKnown RBP17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 CRISPLD1Q9H336 500 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 RAPGEFL1Q9UHV5 662 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 EVLQ9UI08 416 aaPredicted RBP17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 CDV3Q9UKY7 258 aaKnown RBP17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 PADI3Q9ULW8 664 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 ARL5CA6NH57 179 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 CENPXA8MT69 81 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 SOCS2O14508 198 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 ECI2O75521 394 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 INTS6LQ5JSJ4 861 aaKnown RBP17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 TRNP1Q6NT89 227 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 FBXL19Q6PCT2 694 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 ADGRG6Q86SQ4 1221 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 RAB2BQ8WUD1 216 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 HIPK3Q9H422 1215 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 EMCNQ9ULC0 261 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 KLHL20Q9Y2M5 609 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 KPNA3O00505 521 aaPredicted RBP17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 CXCR6O00574 342 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 TSPAN19P0C672 248 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 KIR3DL1P43629 444 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 ADAM17P78536 824 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 TRAP1Q12931 704 aaKnown RBP17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 HERC3Q15034 1050 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 ZNF423Q2M1K9 1284 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 ZNF789Q5FWF6 425 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 OGFRL1Q5TC84 451 aaPredicted RBP17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 VN1R5Q7Z5H4 357 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 EPHX4Q8IUS5 362 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 GPR65Q8IYL9 337 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 SMOXQ9NWM0 555 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 CLCA2Q9UQC9 943 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 MYH9P35579 1960 aaKnown RBP17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 ARVCFO00192 962 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 CNTN5O94779 1100 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 C1RP00736 705 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 TUSC3Q13454 348 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 COLEC12Q5KU26 742 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 RNF180Q86T96 592 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 CENPSQ8N2Z9 138 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 SLC13A3Q8WWT9 602 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 NSMCE3Q96MG7 304 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 LRRC3Q9BY71 257 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 SPON1Q9HCB6 807 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 RPS6KA6Q9UK32 745 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 LYVE1Q9Y5Y7 322 aa17.69■□□□□ 0.42
ATPAF1-214ENST00000576409 SMIM35A0A1B0GVV1 85 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 IRAK2O43187 625 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 SUV39H1O43463 412 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 AIREO43918 545 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 NDST2P52849 883 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 CCDC149Q6ZUS6 474 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 TRAPPC5Q8IUR0 188 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 PHACTR4Q8IZ21 702 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 BTN2A3PQ96KV6 586 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 TDRD1Q9BXT4 1180 aaKnown RBP17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 GMPR2Q9P2T1 348 aaKnown RBP17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 AXIN1O15169 862 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 STK16O75716 305 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 IFNA14P01570 189 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms