RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 S1PR4O95977 384 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 FUCA1P04066 466 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 ABHD2P08910 425 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 LEPRP48357 1165 aaKnown RBP16.85■□□□□ 0.29
NUP88-210ENST00000574867 CTSCP53634 463 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 ILF2Q12905 390 aaKnown RBP16.85■□□□□ 0.29
NUP88-210ENST00000574867 MAP9Q49MG5 647 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 ZNF542PQ5EBM4 170 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 CRTC3Q6UUV7 619 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 PRR23CQ6ZRP0 262 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 DET1Q7L5Y6 550 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 FSTL5Q8N475 847 aaPredicted RBP16.85■□□□□ 0.29
NUP88-210ENST00000574867 MINDY1Q8N5J2 469 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 AENQ8WTP8 325 aaKnown RBP16.85■□□□□ 0.29
NUP88-210ENST00000574867 CCDC97Q96F63 343 aaPredicted RBP16.85■□□□□ 0.29
NUP88-210ENST00000574867 TIMM29Q9BSF4 260 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 PARD6AQ9NPB6 346 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 SPASTQ9UBP0 616 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 GNPTGQ9UJJ9 305 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 DNMT3AQ9Y6K1 912 aaPredicted RBP16.85■□□□□ 0.29
NUP88-210ENST00000574867 UBA6A0AVT1 1052 aaPredicted RBP16.84■□□□□ 0.29
NUP88-210ENST00000574867 ESR1P03372 595 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 GSTM1P09488 218 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 OR56A5P0C7T3 313 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 ZNF883P0CG24 379 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 CTSEP14091 401 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 EPHA8P29322 1005 aaPredicted RBP16.84■□□□□ 0.29
NUP88-210ENST00000574867 GSTM4Q03013 218 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 NAA30Q147X3 362 aaPredicted RBP16.84■□□□□ 0.29
NUP88-210ENST00000574867 ELOCQ15369 112 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 TMEM220Q6QAJ8 160 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 ZNF547Q8IVP9 402 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 PNPLA1Q8N8W4 532 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 SGF29Q96ES7 293 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 EDEM2Q9BV94 578 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 LRRC61Q9BV99 259 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 TSSK1BQ9BXA7 367 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 P2RY12Q9H244 342 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 ACSS3Q9H6R3 686 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 FBXO6Q9NRD1 293 aaPredicted RBP16.84■□□□□ 0.29
NUP88-210ENST00000574867 GPSM3Q9Y4H4 160 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 H3BMM5 538 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 RIPK2O43353 540 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 PIAS2O75928 621 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 TGM1P22735 817 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 MPP1Q00013 466 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 ILF3Q12906 894 aaKnown RBP eCLIP16.84■□□□□ 0.29
NUP88-210ENST00000574867 KBTBD12Q3ZCT8 623 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 PRRT3Q5FWE3 981 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 SDR16C5Q8N3Y7 309 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 CLDN19Q8N6F1 224 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 ZNF548Q8NEK5 533 aaPredicted RBP16.84■□□□□ 0.29
NUP88-210ENST00000574867 CAVIN3Q969G5 261 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 LINC00615Q96LM1 132 aaPredicted RBP16.84■□□□□ 0.29
NUP88-210ENST00000574867 CYTH2Q99418 400 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 TCEAL2Q9H3H9 227 aaPredicted RBP16.84■□□□□ 0.29
NUP88-210ENST00000574867 DNAAF2Q9NVR5 837 aaKnown RBP16.84■□□□□ 0.29
NUP88-210ENST00000574867 CORO1CQ9ULV4 474 aaPredicted RBP16.84■□□□□ 0.29
NUP88-210ENST00000574867 COMMD10Q9Y6G5 202 aa16.84■□□□□ 0.29
NUP88-210ENST00000574867 KNL1Q8NG31 2342 aa16.83■□□□□ 0.28
NUP88-210ENST00000574867 A0A087WUV0 522 aaPredicted RBP16.83■□□□□ 0.28
NUP88-210ENST00000574867 CTIFO43310 598 aaKnown RBP16.83■□□□□ 0.28
NUP88-210ENST00000574867 SGTAO43765 313 aa16.83■□□□□ 0.28
NUP88-210ENST00000574867 KCNJ13O60928 360 aa16.83■□□□□ 0.28
NUP88-210ENST00000574867 C1QAP02745 245 aa16.83■□□□□ 0.28
NUP88-210ENST00000574867 FTH1P02794 183 aa16.83■□□□□ 0.28
NUP88-210ENST00000574867 VCLP18206 1134 aa16.83■□□□□ 0.28
NUP88-210ENST00000574867 EIF3BP55884 814 aaKnown RBP16.83■□□□□ 0.28
NUP88-210ENST00000574867 INSCQ1MX18 579 aa16.83■□□□□ 0.28
NUP88-210ENST00000574867 AASDHQ4L235 1098 aaPredicted RBP16.83■□□□□ 0.28
NUP88-210ENST00000574867 PRAMEF14Q5SWL7 426 aa16.83■□□□□ 0.28
NUP88-210ENST00000574867 DCLK2Q8N568 766 aa16.83■□□□□ 0.28
NUP88-210ENST00000574867 MYRIPQ8NFW9 859 aa16.83■□□□□ 0.28
NUP88-210ENST00000574867 GSDMCQ9BYG8 508 aa16.83■□□□□ 0.28
NUP88-210ENST00000574867 CCDC68Q9H2F9 335 aa16.83■□□□□ 0.28
NUP88-210ENST00000574867 SMYD2Q9NRG4 433 aa16.83■□□□□ 0.28
NUP88-210ENST00000574867 TXNDC16Q9P2K2 825 aa16.83■□□□□ 0.28
NUP88-210ENST00000574867 PCYT1BQ9Y5K3 369 aaPredicted RBP16.83■□□□□ 0.28
NUP88-210ENST00000574867 CSNK1G3Q9Y6M4 447 aa16.83■□□□□ 0.28
NUP88-210ENST00000574867 AQP9O43315 295 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 CD151P48509 253 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 SHBQ15464 509 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 KLHL38Q2WGJ6 581 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 PTRHD1Q6GMV3 140 aaKnown RBP16.82■□□□□ 0.28
NUP88-210ENST00000574867 CHST15Q7LFX5 561 aaPredicted RBP16.82■□□□□ 0.28
NUP88-210ENST00000574867 C11orf96Q7Z7L8 435 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 CTAGE3PQ8IX95 158 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 BIRC8Q96P09 236 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 CPNE1Q99829 537 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 TMEM168Q9H0V1 697 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 IL21RQ9HBE5 538 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 SLC17A6Q9P2U8 582 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 RABGEF1Q9UJ41 708 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 CRYL1Q9Y2S2 319 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 PRKAB1Q9Y478 270 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 PRSS21Q9Y6M0 314 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 PIKFYVEQ9Y2I7 2098 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 PCDHGA12O60330 932 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 ACP5P13686 325 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 ZNF789Q5FWF6 425 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms