RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 CAPNS1P04632 268 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 BRAFP15056 766 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 GLB1P16278 677 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 MSH3P20585 1137 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 ITGALP20701 1170 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 ACRV1P26436 265 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 ARNTP27540 789 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 NMBRP28336 390 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 CASQ1P31415 396 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 PDX1P52945 283 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 E2F1Q01094 437 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 CACNG1Q06432 222 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 NR1D2Q14995 579 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 DBN1Q16643 649 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 BCL7AQ4VC05 210 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 ZRANB3Q5FWF4 1079 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.41□□□□□ -1.06
UBR1-204ENST00000563239 RNASEH2BQ5TBB1 312 aaKnown RBP8.41□□□□□ -1.06
UBR1-204ENST00000563239 HES3Q5TGS1 186 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 IYDQ6PHW0 289 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 DET1Q7L5Y6 550 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 TMPRSS12Q86WS5 348 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 KLHL7Q8IXQ5 586 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 CACTIN-AS1Q8N1I8 211 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 SFRP1Q8N474 314 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 DCBLD1Q8N8Z6 715 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 MAPK15Q8TD08 544 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 SLC37A2Q8TED4 501 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 GRK7Q8WTQ7 553 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 GATA6Q92908 595 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 PEX13Q92968 403 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 NAT6Q93015 286 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 ULK4Q96C45 1275 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 SGSM3Q96HU1 749 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 SERPINB12Q96P63 405 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 TRIM56Q9BRZ2 755 aaKnown RBP8.41□□□□□ -1.06
UBR1-204ENST00000563239 IL22Q9GZX6 179 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 PRDM8Q9NQV8 689 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 ZDHHC3Q9NYG2 299 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 LRIT1Q9P2V4 623 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 RNF14Q9UBS8 474 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 CRLS1Q9UJA2 301 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 PRSS21Q9Y6M0 314 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 SLC30A1Q9Y6M5 507 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 RP1P56715 2156 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 PRAMEF33A0A0G2JMD5 474 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 GOLGA8MH3BSY2 632 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 CCDC188H7C350 402 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 DNALI1O14645 258 aaPredicted RBP8.4□□□□□ -1.06
UBR1-204ENST00000563239 NUDT21O43809 227 aaKnown RBP8.4□□□□□ -1.06
UBR1-204ENST00000563239 SNX2O60749 519 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 MT-CO3P00414 261 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 MLNP12872 115 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 F3P13726 295 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 PNLIPP16233 465 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 FASLGP48023 281 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 ARCN1P48444 511 aaKnown RBP8.4□□□□□ -1.06
UBR1-204ENST00000563239 UBE2IP63279 158 aaKnown RBP8.4□□□□□ -1.06
UBR1-204ENST00000563239 CCL7P80098 99 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 DR1Q01658 176 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 DMPKQ09013 629 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 TARDBPQ13148 414 aaKnown RBP eCLIP8.4□□□□□ -1.06
UBR1-204ENST00000563239 LAMB3Q13751 1172 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 GTF2H3Q13889 308 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 PPP1R7Q15435 360 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 INSCQ1MX18 579 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 FNBP1LQ5T0N5 605 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 AGAP9Q5VTM2 703 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 CES3Q6UWW8 571 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 ABRAXAS1Q6UWZ7 409 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 NLRP9Q7RTR0 991 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 TAS2R42Q7RTR8 314 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 ZNF572Q7Z3I7 529 aaPredicted RBP8.4□□□□□ -1.06
UBR1-204ENST00000563239 TMPRSS9Q7Z410 1059 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 SPRED1Q7Z699 444 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 JAMLQ86YT9 394 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 TRAPPC5Q8IUR0 188 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 PPIL6Q8IXY8 311 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 GALNT15Q8N3T1 639 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 CLDN19Q8N6F1 224 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 SPATA4Q8NEY3 305 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 PPHLN1Q8NEY8 458 aaKnown RBP8.4□□□□□ -1.06
UBR1-204ENST00000563239 OR6C4Q8NGE1 309 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 MFSD3Q96ES6 412 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 SIGLEC10Q96LC7 697 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 LINC00615Q96LM1 132 aaPredicted RBP8.4□□□□□ -1.06
UBR1-204ENST00000563239 FCRL3Q96P31 734 aaPredicted RBP8.4□□□□□ -1.06
UBR1-204ENST00000563239 COPS8Q99627 209 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 TRIM51Q9BSJ1 452 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 MFRPQ9BY79 579 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 ZCCHC2Q9C0B9 1178 aaKnown RBP8.4□□□□□ -1.06
UBR1-204ENST00000563239 MRM3Q9HC36 420 aaKnown RBP8.4□□□□□ -1.06
UBR1-204ENST00000563239 EVA1BQ9NVM1 165 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 BFARQ9NZS9 450 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 MARCH4Q9P2E8 410 aaPredicted RBP8.4□□□□□ -1.06
UBR1-204ENST00000563239 ZNF624Q9P2J8 865 aaPredicted RBP8.4□□□□□ -1.06
UBR1-204ENST00000563239 SOX13Q9UN79 622 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 DNAJC16Q9Y2G8 782 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 WDR37Q9Y2I8 494 aa8.4□□□□□ -1.06
UBR1-204ENST00000563239 DNMT3AQ9Y6K1 912 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms