RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ADAMTS4O75173 837 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 OR4F21O95013 312 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 HPRP00739 348 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 ESR1P03372 595 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 ASGR1P07306 291 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 ANXA6P08133 673 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 RAP2AP10114 183 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 NCK1P16333 377 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 IL12AP29459 219 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 PTGER3P43115 390 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 HK3P52790 923 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 OXCT1P55809 520 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 FAM189BP81408 668 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 EPS8Q12929 822 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 PMS2P3Q13401 168 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 PWP1Q13610 501 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 CBX2Q14781 532 aaPredicted RBP12.94□□□□□ -0.34
USB1-207ENST00000563149 RAB39AQ14964 217 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 TRIM71Q2Q1W2 868 aaKnown RBP12.94□□□□□ -0.34
USB1-207ENST00000563149 Q6ZSR9 355 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 ATAD1Q8NBU5 361 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 OR8J3Q8NGG0 315 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 CD200R1Q8TD46 325 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 LINGO1Q96FE5 620 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 TMEM74Q96NL1 305 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 FAM193BQ96PV7 902 aaPredicted RBP12.94□□□□□ -0.34
USB1-207ENST00000563149 AP3M1Q9Y2T2 418 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 TTC3P53804 2025 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 FRMPD3Q5JV73 1810 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 A0A0D9SEW6 157 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 SEPT4O43236 478 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 NOL3O60936 208 aaKnown RBP12.93□□□□□ -0.34
USB1-207ENST00000563149 GMNNO75496 209 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 CPNE6O95741 557 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 PRLP01236 227 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 MSH3P20585 1137 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 MC4RP32245 332 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 SCNN1BP51168 640 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 GALK1P51570 392 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 ALDH3A2P51648 485 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 TUBA3CQ13748 450 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 TGFBIQ15582 683 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 TIGD2Q4W5G0 525 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 FAM98BQ52LJ0 330 aaKnown RBP12.93□□□□□ -0.34
USB1-207ENST00000563149 CTSL3PQ5NE16 218 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 RBM48Q5RL73 367 aaKnown RBP12.93□□□□□ -0.34
USB1-207ENST00000563149 KLHL35Q6PF15 583 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 DLEU7Q6UYE1 221 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 RNF165Q6ZSG1 346 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 KCTD8Q6ZWB6 473 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 KLHDC9Q8NEP7 349 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 OR7D4Q8NG98 312 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 C2orf15Q8WU43 125 aaKnown RBP12.93□□□□□ -0.34
USB1-207ENST00000563149 EEF1AKMT1Q8WVE0 214 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 POP5Q969H6 163 aaKnown RBP12.93□□□□□ -0.34
USB1-207ENST00000563149 THAP11Q96EK4 314 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 MYEOVQ96EZ4 313 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 VPS50Q96JG6 964 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 RNF145Q96MT1 663 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 CCDC115Q96NT0 180 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 CGREF1Q99674 301 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 SYT17Q9BSW7 474 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 ADGRE3Q9BY15 652 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 UGT2B28Q9BY64 529 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 POLR1BQ9H9Y6 1135 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 INTS7Q9NVH2 962 aaKnown RBP12.93□□□□□ -0.34
USB1-207ENST00000563149 PCDHGA11Q9Y5H2 935 aa12.93□□□□□ -0.34
USB1-207ENST00000563149 ILVBLA1L0T0 632 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 NCF1BA6NI72 391 aaPredicted RBP12.92□□□□□ -0.34
USB1-207ENST00000563149 NCF1CA8MVU1 366 aaPredicted RBP12.92□□□□□ -0.34
USB1-207ENST00000563149 E5RI56 91 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 H3BMQ9 156 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 STX7O15400 261 aaKnown RBP12.92□□□□□ -0.34
USB1-207ENST00000563149 TLR5O60602 858 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 CLDN11O75508 207 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 SNAP29O95721 258 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 NCF1P14598 390 aaPredicted RBP12.92□□□□□ -0.34
USB1-207ENST00000563149 HOXB6P17509 224 aaKnown RBP12.92□□□□□ -0.34
USB1-207ENST00000563149 GGT1P19440 569 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 JAK1P23458 1154 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 RPL10P27635 214 aaKnown RBP12.92□□□□□ -0.34
USB1-207ENST00000563149 SLC11A2P49281 568 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 ARSFP54793 590 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 TMBIM6P55061 237 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 OR4D2P58180 307 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 ERVPABLB-1P60509 514 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 CHRNB3Q05901 458 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 GPR17Q13304 367 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 DAG1Q14118 895 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 CLLU1OSQ5K130 101 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 PSAPL1Q6NUJ1 521 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 ZNF773Q6PK81 442 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 RTN4RL1Q86UN2 441 aaPredicted RBP12.92□□□□□ -0.34
USB1-207ENST00000563149 SFRP1Q8N474 314 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 CDYL2Q8N8U2 506 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 SIDT2Q8NBJ9 832 aaKnown RBP12.92□□□□□ -0.34
USB1-207ENST00000563149 PDPRQ8NCN5 879 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 OR52E4Q8NGH9 312 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 METTL6Q8TCB7 284 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 COG8Q96MW5 612 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms