RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 C6orf15Q6UXA7 325 aaPredicted RBP16.4■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 MFSD7Q6UXD7 560 aa16.4■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 WASH2PQ6VEQ5 465 aa16.4■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 GALNT6Q8NCL4 622 aa16.4■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 ELMO2Q96JJ3 720 aa16.4■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 WASH6PQ9NQA3 447 aa16.4■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 CROTQ9UKG9 612 aa16.4■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 HYOU1Q9Y4L1 999 aa16.4■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 LOC285095A0A1B0GVY8 99 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 GPR39O43194 453 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 KIAA0754O94854 1291 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 NDUFA10O95299 355 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 FURINP09958 794 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 PECAM1P16284 738 aaPredicted RBP16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 CA5AP35218 305 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 FOXK1P85037 733 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 WASHC5Q12768 1159 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 IL11RAQ14626 422 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 IGFBP7Q16270 282 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 CCDC70Q6NSX1 233 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 KDELC1Q6UW63 502 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 FAM92BQ6ZTR7 304 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 TRAPPC5Q8IUR0 188 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 RHOT2Q8IXI1 618 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 RHOT1Q8IXI2 618 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 TTC30BQ8N4P2 665 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 GPR150Q8NGU9 434 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 KLHL6Q8WZ60 621 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 CXorf40BQ96DE9 158 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 SRPK1Q96SB4 655 aaKnown RBP16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 IL26Q9NPH9 171 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 ABHD10Q9NUJ1 306 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 ANAPC2Q9UJX6 822 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 KCNMB2Q9Y691 235 aa16.39■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 GOLGA6L3A6NEY3 463 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 TPM3P06753 285 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 FGF5P12034 268 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 TNNT1P13805 278 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 NFKB1P19838 968 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 CDKN2BP42772 138 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 CHRNA4P43681 627 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 WNT3AP56704 352 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 SRSF1Q07955 248 aaKnown RBP eCLIP16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 ADCY2Q08462 1091 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 TRIM14Q14142 442 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 TAZQ16635 292 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 SIRPB2Q5JXA9 342 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 CACHD1Q5VU97 1274 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 IRGCQ6NXR0 463 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 RASGRP3Q8IV61 690 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 RBM12BQ8IXT5 1001 aaKnown RBP16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 GDAP1Q8TB36 358 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 STAMBPL1Q96FJ0 436 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 RAB33BQ9H082 229 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 NHEJ1Q9H9Q4 299 aaPredicted RBP16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 DDX56Q9NY93 547 aaKnown RBP16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 EPHA6Q9UF33 1036 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 FAM153AQ9UHL3 310 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 KCTD3Q9Y597 815 aa16.38■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 F5H423 210 aaPredicted RBP16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 SPAG6O75602 509 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 TIAF1O95411 115 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 VCLP18206 1134 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 NELFEP18615 380 aaKnown RBP16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 NR1D1P20393 614 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 COMTP21964 271 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 SLC1A1P43005 524 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 NR2C2P49116 596 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 CTSCP53634 463 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 GTF2H3Q13889 308 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 ERV3-1Q14264 604 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 LLGL1Q15334 1064 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 LACTB2Q53H82 288 aaPredicted RBP16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 ODF2Q5BJF6 829 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 FAM83HQ6ZRV2 1179 aaPredicted RBP16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 TMEM135Q86UB9 458 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 RASGEF1AQ8N9B8 481 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 DTX3LQ8TDB6 740 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 TFB1MQ8WVM0 346 aaKnown RBP16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 ZDHHC12Q96GR4 267 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 OXNAD1Q96HP4 312 aaPredicted RBP16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 MRGPRX2Q96LB1 330 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 TRABDQ9H4I3 376 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 ZNHIT6Q9NWK9 470 aaKnown RBP16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 IL17CQ9P0M4 197 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 LNPEPQ9UIQ6 1025 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 TP53TG5Q9Y2B4 290 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 PTPN13Q12923 2485 aa16.37■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 IGHV5-51A0A0C4DH38 117 aa16.36■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 K7EM74 188 aa16.36■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 GAPDHSO14556 408 aaPredicted RBP16.36■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 UGT1A9O60656 530 aa16.36■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 CST8O60676 142 aa16.36■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 MFAP3LO75121 409 aa16.36■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 KATNA1O75449 491 aa16.36■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 UGT1A6P19224 532 aa16.36■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 UGT1A1P22309 533 aa16.36■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 UGT1A4P22310 534 aa16.36■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 FECHP22830 423 aa16.36■□□□□ 0.21
VPS9D1-AS1-201ENST00000562298 SPAM1P38567 509 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms