RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 PLXNB3Q9ULL4 1909 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 ZFC3H1O60293 1989 aaKnown RBP9.97□□□□□ -0.81
HERC1-212ENST00000561348 KNTC1P50748 2209 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 CHD8Q9HCK8 2581 aa9.96□□□□□ -0.81
HERC1-212ENST00000561348 CEP295Q9C0D2 2601 aa9.96□□□□□ -0.81
HERC1-212ENST00000561348 OR52A4PA6NMU1 304 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 A8MU76 341 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 NUDT21O43809 227 aaKnown RBP9.96□□□□□ -0.82
HERC1-212ENST00000561348 AVILO75366 819 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 GOT2P00505 430 aaKnown RBP9.96□□□□□ -0.82
HERC1-212ENST00000561348 F3P13726 295 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 SLC2A4P14672 509 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 ITGB6P18564 788 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 ADRA1DP25100 572 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 HALP42357 657 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 CLCNKAP51800 687 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 CSE1LP55060 971 aaKnown RBP9.96□□□□□ -0.82
HERC1-212ENST00000561348 GABREP78334 506 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 CACNG1Q06432 222 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 MSLNQ13421 630 aaPredicted RBP9.96□□□□□ -0.82
HERC1-212ENST00000561348 NFE2L1Q14494 772 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 ISXQ2M1V0 245 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 FASTKD1Q53R41 847 aaKnown RBP9.96□□□□□ -0.82
HERC1-212ENST00000561348 TSTD2Q5T7W7 516 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 SPRED1Q7Z699 444 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 B3GNT8Q7Z7M8 397 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 SLC9B2Q86UD5 537 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 PIM3Q86V86 326 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 JAMLQ86YT9 394 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 ZNF547Q8IVP9 402 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 CFAP206Q8IYR0 622 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 NXPE1Q8N323 547 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 CLDN19Q8N6F1 224 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 DDHD1Q8NEL9 900 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 JPH3Q8WXH2 748 aaPredicted RBP9.96□□□□□ -0.82
HERC1-212ENST00000561348 NCSTNQ92542 709 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 ZNF592Q92610 1267 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 GATA6Q92908 595 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 NXPE2Q96DL1 559 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 CCDC97Q96F63 343 aaPredicted RBP9.96□□□□□ -0.82
HERC1-212ENST00000561348 NAF1Q96HR8 494 aaKnown RBP9.96□□□□□ -0.82
HERC1-212ENST00000561348 ZNF778Q96MU6 729 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 CASS4Q9NQ75 786 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 IMP3Q9NV31 184 aaKnown RBP9.96□□□□□ -0.82
HERC1-212ENST00000561348 SYBUQ9NX95 663 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 ZDHHC3Q9NYG2 299 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 SCHIP1Q9P0W5 487 aaPredicted RBP9.96□□□□□ -0.82
HERC1-212ENST00000561348 SATB2Q9UPW6 733 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 TCAF1Q9Y4C2 921 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 UNC13CQ8NB66 2214 aa9.96□□□□□ -0.82
HERC1-212ENST00000561348 TPRP12270 2363 aaKnown RBP9.95□□□□□ -0.82
HERC1-212ENST00000561348 AKAP13Q12802 2813 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 SPEGQ15772 3267 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 PRAMEF33A0A0G2JMD5 474 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 A0A1W2PQM1 296 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 GPR89AB7ZAQ6 455 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 CHUKO15111 745 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 B4GAT1O43505 415 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 SUN1O94901 812 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 PROS1P07225 676 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 GPR89BP0CG08 455 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 HGFP14210 728 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 ATP1B2P14415 290 aaPredicted RBP9.95□□□□□ -0.82
HERC1-212ENST00000561348 TYRP1P17643 537 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 AMD1P17707 334 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 INHBCP55103 352 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 MRPS25P82663 173 aaKnown RBP9.95□□□□□ -0.82
HERC1-212ENST00000561348 LAMB3Q13751 1172 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 PLCL1Q15111 1095 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 GPR33Q49SQ1 333 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 PCID2Q5JVF3 399 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 ANKRD22Q5VYY1 191 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 IYDQ6PHW0 289 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 SYT10Q6XYQ8 523 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 FAM83HQ6ZRV2 1179 aaPredicted RBP9.95□□□□□ -0.82
HERC1-212ENST00000561348 LDB1Q86U70 411 aaPredicted RBP9.95□□□□□ -0.82
HERC1-212ENST00000561348 DCBLD1Q8N8Z6 715 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 RCBTB1Q8NDN9 531 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 TTC1Q99614 292 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 NUDT22Q9BRQ3 303 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 TIMM29Q9BSF4 260 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 TBC1D10AQ9BXI6 508 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 TRIM31Q9BZY9 425 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 STRADBQ9C0K7 418 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 WWP1Q9H0M0 922 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 SAMD15Q9P1V8 674 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 CPNE7Q9UBL6 633 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 ZMIZ1Q9ULJ6 1067 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 MAD1L1Q9Y6D9 718 aa9.95□□□□□ -0.82
HERC1-212ENST00000561348 MROH6A6NGR9 719 aa9.94□□□□□ -0.82
HERC1-212ENST00000561348 D6RAR5 112 aa9.94□□□□□ -0.82
HERC1-212ENST00000561348 GOLGA8KD6RF30 607 aa9.94□□□□□ -0.82
HERC1-212ENST00000561348 GOLGA8TH3BQL2 631 aa9.94□□□□□ -0.82
HERC1-212ENST00000561348 BRINP1O60477 761 aa9.94□□□□□ -0.82
HERC1-212ENST00000561348 TCEA3O75764 348 aa9.94□□□□□ -0.82
HERC1-212ENST00000561348 CPNE6O95741 557 aa9.94□□□□□ -0.82
HERC1-212ENST00000561348 SLC35G4P0C7Q5 338 aa9.94□□□□□ -0.82
HERC1-212ENST00000561348 JMJD7P0C870 316 aa9.94□□□□□ -0.82
HERC1-212ENST00000561348 ACRV1P26436 265 aa9.94□□□□□ -0.82
HERC1-212ENST00000561348 NMBRP28336 390 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms