RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 KNL1Q8NG31 2342 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 C17orf113A0A1B0GUU1 675 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 FAM159BA6NKW6 160 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 PCDHGA12O60330 932 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 OR1I1O60431 355 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 POP7O75817 140 aaKnown RBP12.09□□□□□ -0.47
USP8-209ENST00000560297 PIAS2O75928 621 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 ESR1P03372 595 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 SLC1A2P43004 574 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 PRLHRP49683 370 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 CCT8P50990 548 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 ILF3Q12906 894 aaKnown RBP eCLIP12.09□□□□□ -0.47
USP8-209ENST00000560297 SLC14A1Q13336 389 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 NAB1Q13506 487 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 MAP9Q49MG5 647 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 PRRT3Q5FWE3 981 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 EMBQ6PCB8 327 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 LVRNQ6Q4G3 990 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 DET1Q7L5Y6 550 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 CHST15Q7LFX5 561 aaPredicted RBP12.09□□□□□ -0.47
USP8-209ENST00000560297 AMZ2Q86W34 360 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 TRAPPC5Q8IUR0 188 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 DENND6AQ8IWF6 608 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 DCLK2Q8N568 766 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 MINDY1Q8N5J2 469 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 CLDN19Q8N6F1 224 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 GPBAR1Q8TDU6 330 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 FBF1Q8TES7 1133 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 CYTH2Q99418 400 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 TIMM29Q9BSF4 260 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 TSSK1BQ9BXA7 367 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 FUT8Q9BYC5 575 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 TMEM168Q9H0V1 697 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 PARD6AQ9NPB6 346 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 TXNDC16Q9P2K2 825 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 GNPTGQ9UJJ9 305 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 PNMA8BQ9ULN7 279 aaPredicted RBP12.09□□□□□ -0.47
USP8-209ENST00000560297 PCDHGB2Q9Y5G2 931 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 COMMD10Q9Y6G5 202 aa12.09□□□□□ -0.47
USP8-209ENST00000560297 PLXNA2O75051 1894 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 CACNA1EQ15878 2313 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 A0A087WUV0 522 aaPredicted RBP12.08□□□□□ -0.48
USP8-209ENST00000560297 UBA6A0AVT1 1052 aaPredicted RBP12.08□□□□□ -0.48
USP8-209ENST00000560297 OR2AG2A6NM03 316 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 CDX4O14627 284 aaPredicted RBP12.08□□□□□ -0.48
USP8-209ENST00000560297 TPP1O14773 563 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 AQP9O43315 295 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 SGTAO43765 313 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 HAUS5O94927 633 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 ACSL3O95573 720 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 AHSGP02765 367 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 FTH1P02794 183 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 ABHD2P08910 425 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 DGKAP23743 735 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 CLCNKAP51800 687 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 CTSCP53634 463 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 SHBQ15464 509 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 SMAD1Q15797 465 aaKnown RBP12.08□□□□□ -0.48
USP8-209ENST00000560297 AASDHQ4L235 1098 aaPredicted RBP12.08□□□□□ -0.48
USP8-209ENST00000560297 KCTD16Q68DU8 428 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 PTRHD1Q6GMV3 140 aaKnown RBP12.08□□□□□ -0.48
USP8-209ENST00000560297 CRTC3Q6UUV7 619 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 MICALCLQ6ZW33 695 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 GKN2Q86XP6 184 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 ZNF547Q8IVP9 402 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 LMX1AQ8TE12 382 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 LPGAT1Q92604 370 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 PANX3Q96QZ0 392 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 CPNE1Q99829 537 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 CCM2Q9BSQ5 444 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 EDEM2Q9BV94 578 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 GSDMCQ9BYG8 508 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 P2RY12Q9H244 342 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 CCDC68Q9H2F9 335 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 IL21RQ9HBE5 538 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 TMEM9BQ9NQ34 198 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 TM7SF3Q9NS93 570 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 RABGEF1Q9UJ41 708 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 CORO1CQ9ULV4 474 aaPredicted RBP12.08□□□□□ -0.48
USP8-209ENST00000560297 CRYL1Q9Y2S2 319 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 PRKAB1Q9Y478 270 aa12.08□□□□□ -0.48
USP8-209ENST00000560297 TNRC6BQ9UPQ9 1833 aaKnown RBP12.08□□□□□ -0.48
USP8-209ENST00000560297 PI4KAP42356 2102 aa12.07□□□□□ -0.48
USP8-209ENST00000560297 MGAT4DA6NG13 374 aa12.07□□□□□ -0.48
USP8-209ENST00000560297 LMO7DNF2Z398 122 aa12.07□□□□□ -0.48
USP8-209ENST00000560297 SCAMP1O15126 338 aa12.07□□□□□ -0.48
USP8-209ENST00000560297 KPNA5O15131 536 aa12.07□□□□□ -0.48
USP8-209ENST00000560297 RIPK2O43353 540 aa12.07□□□□□ -0.48
USP8-209ENST00000560297 GFRA3O60609 400 aa12.07□□□□□ -0.48
USP8-209ENST00000560297 ANXA6P08133 673 aa12.07□□□□□ -0.48
USP8-209ENST00000560297 PKMP14618 531 aaKnown RBP12.07□□□□□ -0.48
USP8-209ENST00000560297 EPHA8P29322 1005 aaPredicted RBP12.07□□□□□ -0.48
USP8-209ENST00000560297 FMO4P31512 558 aa12.07□□□□□ -0.48
USP8-209ENST00000560297 CD151P48509 253 aa12.07□□□□□ -0.48
USP8-209ENST00000560297 EIF3BP55884 814 aaKnown RBP12.07□□□□□ -0.48
USP8-209ENST00000560297 CTBSQ01459 385 aa12.07□□□□□ -0.48
USP8-209ENST00000560297 PLOD1Q02809 727 aaPredicted RBP12.07□□□□□ -0.48
USP8-209ENST00000560297 BNIP3Q12983 259 aa12.07□□□□□ -0.48
USP8-209ENST00000560297 NAA30Q147X3 362 aaPredicted RBP12.07□□□□□ -0.48
USP8-209ENST00000560297 INSCQ1MX18 579 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms