RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 MAB21L2Q9Y586 359 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 PZPP20742 1482 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 NKRFO15226 690 aaKnown RBP eCLIP13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 SNX3O60493 162 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 PRAMEF12O95522 483 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 TNFRSF8P28908 595 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 E2F1Q01094 437 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 SF1Q15637 639 aaKnown RBP13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 PLEKHG6Q3KR16 790 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 AARDQ4LEZ3 155 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 CPT1CQ8TCG5 803 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 ABCG4Q9H172 646 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 C19orf12Q9NSK7 152 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 IFNW1P05000 195 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 ITGAVP06756 1048 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 CHMP24386 653 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 TOR1AIP1Q5JTV8 583 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 C17orf64Q86WR6 236 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 PHYKPLQ8IUZ5 450 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 DISC1C4P0D8 188 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 ITGA2BP08514 1039 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 PAEPP09466 180 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 HOXC6P09630 235 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 CLCN7P51798 805 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 HERV-K104P61576 105 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 TLE3Q04726 772 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 GLYATQ6IB77 296 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 UBQLN2Q9UHD9 624 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 ATP7AQ04656 1500 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 OTOL1A6NHN0 477 aaPredicted RBP13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 ADRA2BP18089 450 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 UNC5AQ6ZN44 842 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 SCUBE3Q8IX30 993 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 ZSCAN4Q8NAM6 433 aaPredicted RBP13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 IGDCC4Q8TDY8 1250 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 MALSU1Q96EH3 234 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 BLOC1S4Q9NUP1 217 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 TAS2R3Q9NYW6 316 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 NARFQ9UHQ1 456 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 HMGXB3Q12766 1538 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 ATP6AP2A0A1C7CYW4 349 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 RPL22P35268 128 aaKnown RBP13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 CXCR3P49682 368 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 LAMTOR4Q0VGL1 99 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 MAD2L1BPQ15013 274 aaPredicted RBP13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 CACUL1Q86Y37 369 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 SLC43A3Q8NBI5 491 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 BBS1Q8NFJ9 593 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 FANCFQ9NPI8 374 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 SNTG2Q9NY99 539 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 ICAM1P05362 532 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 CCNB1P14635 433 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 ATP5C1P36542 298 aaKnown RBP13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 LUMP51884 338 aaPredicted RBP13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 GTF2A2P52657 109 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 ANTXR2P58335 489 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 TOMM5Q8N4H5 51 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 MSL3Q8N5Y2 521 aaKnown RBP13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 KCTD7Q96MP8 289 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 COMMD3Q9UBI1 195 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 PCDHGB6Q9Y5F9 930 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 AP1M2Q9Y6Q5 423 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 ATG13O75143 517 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 RASGRP1O95267 797 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 PRKCHP24723 683 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 ATP5A1P25705 553 aaKnown RBP13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 UQCRC1P31930 480 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 RPA4Q13156 261 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 PLEKHN1Q494U1 663 aaPredicted RBP13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 SLC30A10Q6XR72 485 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 ZNF517Q6ZMY9 492 aaPredicted RBP13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 ALYREFQ86V81 257 aaKnown RBP13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 CEP97Q8IW35 865 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 SLC22A15Q8IZD6 547 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 OR10A4Q9H209 315 aa13.73□□□□□ -0.21
CSPG4P12-202ENST00000559989 ISPDA4D126 451 aa13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 ABHD2P08910 425 aa13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 SPPL2CQ8IUH8 684 aa13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 EIF5A2Q9GZV4 153 aaKnown RBP13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 ASF1AQ9Y294 204 aa13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 ENTPD5O75356 428 aa13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 BCAS1O75363 584 aaPredicted RBP13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 ZNF16P17020 682 aaPredicted RBP13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 CAPZA1P52907 286 aa13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 SMARCB1Q12824 385 aa13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 HLFQ16534 295 aa13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 CAPN13Q6MZZ7 669 aaPredicted RBP13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 TMEM110Q86TL2 294 aa13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 ZBTB8BQ8NAP8 495 aaPredicted RBP13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 MFSD3Q96ES6 412 aa13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 C8orf48Q96LL4 319 aa13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 PSKH2Q96QS6 385 aa13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 MRPL17Q9NRX2 175 aaKnown RBP13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 PDE10AQ9Y233 779 aa13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 MICAL3Q7RTP6 2002 aa13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 ILVBLA1L0T0 632 aa13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 LATS1O95835 1130 aa13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 HK1P19367 917 aa13.72□□□□□ -0.21
CSPG4P12-202ENST00000559989 TMPRSS11BQ86T26 416 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms